Rhizobium rosettiformans: D4A92_19075
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Entry
D4A92_19075 CDS
T08393
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03420
Nucleotide excision repair
rros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D4A92_19075
03430 Mismatch repair
D4A92_19075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_19075
Enzymes [BR:
rros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D4A92_19075
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D4A92_19075
MMR (mismatch excision repair)
Other MMR factors
D4A92_19075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3638
DUF4420
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QRF53399
LinkDB
All DBs
Position
3893086..3895563
Genome browser
AA seq
825 aa
AA seq
DB search
MSNGFDDIPFFDEEPAPRKPAASPAPAAGTPAAGGLGIAARAMAARDQARAPDYLSGLNP
EQREAVETVDGPVLVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKE
RIGHLVGGAVEGMPWLGTFHSIGVKLLRRHAELVDLRSDFTILDTDDVVRLIKQIIQAEG
LDDKRWPAKQFAQMIDGWKNKGLDPAQIPEGDARAFANGKGRELYIAYQNRLKTLNACDF
GDLLLHPIRMFKANPDVLKEYHQRFKYVLVDEYQDTNTAQYMWLRLLAQRPPGVPQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAGFLIAHNEGRLG
KTLFTDRVDPNDDKVVVHAAWDSEEEARAVGEEIEQLQRNQHPLNNMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRMVCQPADDLAFERIVNTPKRGLGDTTI
RNLHDYARARDIPMLAAAADIIETDELKPKARKALFDVVTDFRRWQSLLETTPHTELAEQ
ILDESGYTAMWQNDKSAEAPGRLENLKELIRSMEAFESLRGFLEHVSLVMDAETNENLDA
VSIMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKRRCH
IWFVSNRRIHGLWQSTLPSRFLEELPPAHVEVAEAETSYGGYGRNPYGQSRFDKQEPFQN
SYSTPGWKRAQANKTDATRDNWGNRSGHAVERIGYGESGPRAKTIDGELVAKSTTSEPSR
FSVGDRVFHMKFGNGNVSAIEGNKLTIDFDRAGQKRVLDGFVEKA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacggtttcgacgacattcccttcttcgacgaagaacccgcaccgcgcaagcct
gccgcgtcccccgcacccgctgctggcactcctgcagccggtggccttggcattgcggcc
cgcgccatggcagcccgcgaccaggcgagagcgcccgattatctctccggcctcaacccg
gaacagcgcgaagcggtcgaaaccgtcgatgggccggtactggtgctcgcaggcgccggc
accggcaagacacgcgtcctcaccacccgcattgcccatatcctggcaaccgggaaagcc
tttccaagccagatcctggcggtgaccttcaccaacaaggctgcccgcgagatgaaggag
cgcatcggccatctcgttggtggcgccgtcgaaggcatgccctggctcggcacattccac
tcgataggcgtcaagctgcttcgtcgccatgccgaactggttgacctacgctccgacttc
accatcctggacaccgatgatgtcgtgcgtctgatcaagcagatcatccaagccgaaggc
ctcgatgacaaacgctggccggccaagcaattcgcccagatgatcgacggctggaagaac
aaggggctggaccccgcccagatccccgaaggggatgcccgcgccttcgccaacggcaag
ggtcgtgaactctacatcgcctaccagaaccgcctgaagacgctgaacgcctgcgatttc
ggcgacttgctcctgcatccgatccggatgttcaaagcgaacccggacgtgctgaaggaa
tatcatcagcgcttcaaatacgtgctggtcgacgaatatcaggacaccaacaccgcccaa
tacatgtggctgaggctgctggcccagcggccgccgggcgtgccgcaaaatgtctgctgc
gtcggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtggacaacatcctg
cgcttcgagaaggatttccccggcgccaaggtcatcaagctcgagcgcaattaccgttcg
accgaacatatcctgggtgctgccggatttctgatcgcgcataatgagggccgcctcggc
aagaccctattcaccgatcgcgttgatccgaatgacgacaaagtcgttgtccatgccgcc
tgggattcggaagaggaagctcgcgctgtcggtgaggagatcgagcagctccagcgcaat
cagcacccgctgaacaacatggcgatcctcgtccgcgcctccttccagatgcgcgaattc
gaagaccgctttgtaacgctcggcctgaattaccgagtcatcggcggcccgcgcttctac
gagcgcctcgagatccgtgatgccatggcctatttccggatggtctgccagccggccgac
gacctcgccttcgagcgcatcgtcaatacgcctaagcgcggcctcggcgacacgacgatc
cgcaatctgcacgactatgcacgcgcccgcgacatcccgatgctggcggcagcggccgac
atcattgagaccgacgagctgaagcctaaggcccgcaaggcgctcttcgacgtcgtcacg
gattttcgccgctggcagtcgctgctcgaaaccacgccgcataccgaactcgccgaacag
attctcgacgagagcggctatacggccatgtggcagaacgacaagtcggcagaagcgccg
ggccgcctggaaaacctgaaggaactcatccgctcgatggaggccttcgagagcctacgc
ggctttctcgaacacgtgtccctggtcatggatgccgagaccaacgaaaaccttgatgcc
gtctcgatcatgacgctgcattccgccaagggcctcgaattcgagaccgtcttcctgccc
ggctgggaagaaggtctgtttccccaccagcgcgcgctggacgaaggcggccgctcgggt
ctcgaagaagagcgccgcctcgcctatgtcggcatcacccgcgccaagcgtcgctgtcac
atctggttcgtctctaaccgccgcattcatggcctttggcaatccaccctgccgtcgcgc
ttcctcgaagagctaccgcccgcccatgtcgaagtcgcggaagccgagacctcctatggc
ggctacggtcgcaacccctacggccagtcacgcttcgacaagcaggagcccttccagaac
agctattcgacacccggctggaaacgcgcccaggccaacaagaccgacgccacccgcgac
aactggggcaaccgctcaggtcatgctgtggagcggatcggttatggcgaaagcggcccg
agggcgaagacgatcgacggcgaacttgtcgccaagtcgacgacatcggaaccgtcacgc
ttttccgtcggcgaccgcgtcttccacatgaagttcggcaatggaaatgtctcggcgatc
gagggcaacaagctgacgatcgacttcgaccgggcgggccagaaacgcgtgcttgacggg
ttcgttgagaaagcctga
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