Rickettsia rickettsii Hlp#2: RPK_01465
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Entry
RPK_01465 CDS
T01739
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rrp
Rickettsia rickettsii Hlp#2
Pathway
rrp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPK_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrp03400
]
RPK_01465
DNA repair and recombination proteins [BR:
rrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPK_01465
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPK_01465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_22
AAA_7
HH_RND_rel
LarB_N
Microtub_bd
T2SSE
DUF87
P-loop_SecA
AAA_5
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AFB28584
LinkDB
All DBs
Position
complement(272790..274775)
Genome browser
AA seq
661 aa
AA seq
DB search
MNNFSIISEYKPAGDQPKAIDEIIAGLSSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYSEMKSLFPKNAVEYFVSYYDYYQPEAYIARTDTFIEKDSSINEQIDL
MRHAATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMVVNLEPGQSYLRDQLLNDLINLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLAKLDKA
IVFGNSHFVMPQETVNNAISGIEEELQKRLEFLKSQDKPLETQRLNQRTQYDLEMLTETG
SCKGVENYSRFFTGRNAGEPPPTLFEYLPEDALLFVDESHVSVPQIRAMYNGDRARKKVL
VEHGFRLPSALDNRPLKFEEWDKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTIAQGFRVLVTTLTKKMAEDLTAYLQELKYKTSYLHSNVH
TLERIEILRDLRQGTIDVLVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSAGRVILYADKMTKSIDKAVSETLRRRQIQQEYNEKHGIIPKTINRAIHALAEFEK
IDSKLDKKQAHTLFDNPAKLKTHIDKLKKEMLKAASNLEFEQAVKLRDQLKTLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagaatataaaccggcaggcgatcaaccaaaagcaata
gatgaaattatagcagggttaagtagcaaaaaacgctcacaaatgttgcttggtattacg
ggatcaggcaaaacctttactatggcaaatattatagagagaactaatcgtcctactctt
attatggctcataataaaactttagctgcccaaatctattcagagatgaaatcgcttttt
ccaaagaatgccgttgaatactttgtctcatattatgattattaccagcccgaagcttat
atagcacgcaccgatacttttatagaaaaagactcatcaattaacgaacaaattgattta
atgcgtcatgccgctacaagatcgctattagagcgtcgtgacgttatagtagtttcttcc
gtttcctgtatttacggccttggctctcccgatttatattaccaaatggtggttaatcta
gagcctggtcaaagctaccttcgtgatcaactactaaacgatttgataaatctacaatat
gagcgtaacgatatcggatttgagcgtggctgttttagagttaaaggcgacaacatcgat
attttcccctcacattacagcgataaagcttggcgtttatcgtttttcggtaatgaactc
gaatatatccatgaatttgatcccctaacaggtgaaaaacttgctaagctcgataaagct
atagtttttggtaattcacattttgtgatgcctcaagaaacggtcaataatgccatatca
ggtattgaagaagaattacaaaaacgcttagagtttttaaagtcacaagacaaaccactt
gaaactcaaaggctaaatcaacgtactcaatatgatcttgaaatgttaacggaaaccggc
agctgtaaaggcgttgaaaactactctcgctttttcacaggacgtaatgccggtgagccg
cctcctacattattcgaatacctaccagaagatgcattattatttgttgatgaaagccat
gtatccgtaccgcaaattagagcgatgtataacggcgatcgagcaaggaaaaaagttttg
gtagagcatgggtttcgtctaccctctgcacttgataacagacctttaaaatttgaagaa
tgggacaaatttagaccacaaactgtgtttgtatctgcaactccaggaccgttcgagtta
gaagaaaccggcggcacggttgtagaattgattattagacctactgggctgcttgatcct
gaatgtattatcaaacccgctactaaccaagttgaggatttaattagcgaaattcaaacc
actatcgctcaaggttttcgtgttctagtcaccaccttaactaaaaaaatggcagaagat
ttaaccgcctatttgcaggagctaaaatataaaacttcttatttacattctaacgttcat
actctcgaacgtatagagattttacgagatttaagacaaggtactattgatgttttagtc
ggtattaatctattaagggaggggcttgacatccctgaatgcggcttagttgctatactt
gatgcagacaaagaggggtttttgcggtcggaagtatcgttaatacaaacaataggaaga
gctgcaagaaatagcgcgggtagagttatactttatgccgataaaatgactaaatctatc
gataaagctgttagtgaaacgttgcgtagaaggcaaattcagcaggaatataatgaaaaa
cacggcataattccaaaaaccatcaaccgtgctattcacgctttagcagaatttgagaaa
atcgatagtaagcttgataaaaaacaagctcatactttatttgataatcctgctaagcta
aaaacccatattgataaattaaagaaagaaatgcttaaagccgcaagtaatcttgaattt
gaacaagccgtaaaacttcgtgatcagctaaaaactctagaagaagcggcactcgagttg
agttaa
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