Rickettsia rickettsii Hlp#2: RPK_02235
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Entry
RPK_02235 CDS
T01739
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rrp
Rickettsia rickettsii Hlp#2
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrp03016
]
RPK_02235
Enzymes [BR:
rrp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RPK_02235
Transfer RNA biogenesis [BR:
rrp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPK_02235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFB28719
LinkDB
All DBs
Position
complement(392857..393702)
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AA seq
281 aa
AA seq
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MQIIDNQKILEEFCNRLANKACLSIDTEFERRYTYYAQLSIIQVKAEEYCGIIDALSNLD
LNIFNKLLADNNITKIFHAPREDLEIFYNLFKTLPANVFDIQIAANICGFGKQLSYDDLC
YKLIGITIDKTHQKSHWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIVRNNLTNKYQTT
LSALLDVRNYKVEPKDAWKKIKYGSDDKSFNHKIQMLAAYREENAQTINIPRKHFILDED
LIKLSKYPPLNHKDFKNLNLKSKYLRKQKYKDEIISLCNNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattatcgataatcaaaaaatattagaagaattttgtaaccggttagcaaataag
gcatgcttaagcatagatacggaatttgagcgtcgctatacttattatgctcagcttagt
ataattcaagttaaagcagaagaatattgcggaataattgatgcattaagcaatttagat
ctgaatatttttaataagctgcttgcagataataatattactaaaatatttcatgctcct
cgtgaagatttagagattttctataatttatttaaaacactacctgctaatgtttttgat
atacaaattgcagcaaatatttgcggattcggtaaacagctaagctatgatgacctttgc
tataagctaatcggtattactatcgataaaacccaccaaaaatctcactggctaaaacgc
cctattactagtgatatgttaaattatgcaatgttagacgtggagtatttgtataagata
tataaagagttaaataatataattgttagaaataatttaactaataaatatcaaactact
cttagtgctttattagatgtgagaaattataaggttgagccgaaagatgcttggaaaaaa
ataaaatatggaagtgatgataagagttttaatcacaaaattcaaatgcttgcagcttat
cgtgaagagaatgcacaaactataaatattcctcgtaagcattttattttagatgaagat
ttaataaagcttagtaaatacccgccattgaatcataaggattttaaaaatctaaattta
aaaagcaaatatttacgcaaacaaaaatataaagatgaaataataagtttgtgtaataac
ttataa
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