Rickettsia rickettsii Hlp#2: RPK_03235
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Entry
RPK_03235 CDS
T01739
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rrp
Rickettsia rickettsii Hlp#2
Pathway
rrp00300
Lysine biosynthesis
rrp00470
D-Amino acid metabolism
rrp01100
Metabolic pathways
rrp01110
Biosynthesis of secondary metabolites
rrp01120
Microbial metabolism in diverse environments
rrp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPK_03235 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPK_03235 (dapF)
Enzymes [BR:
rrp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPK_03235 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Fer2
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
AFB28894
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All DBs
Position
complement(560855..561667)
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AA seq
270 aa
AA seq
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MISKINFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHNDFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKQDITVMVGNKKLLCNVNDENNISVNVGS
VSFNEAWMPSRDKVWEFAERYMIDLKETICVDIGNPHVVIFSKLEPQDQKIVGERLQAKE
LFADGVNVNFAEVKDNKIYLSVWERGAGLTLACGSGACGSFAAGLKHGFIHSPSTIVFKH
GNLTMKEENGNIIMQGAATLVARGEYYCEQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattttgttattgtt
aacaaacgagatttatcaagttcatatgatttatcgcagttagcaaaaaatatggctgag
cgtcatacaggtatcggttgcgatcagtttattatttatgaagagcataatgatttttat
gaaatgattatatataacatagacggctctagtgctaaattatgcggtaatgctacaaga
tgtttagccaagttaatttatcttgatacgggaaagcaggatattaccgtaatggtaggc
aataaaaaattgctatgtaatgtcaatgatgaaaataatattagcgttaatgtaggaagc
gtgagttttaatgaagcttggatgccaagtcgtgataaagtttgggaatttgcagagcgt
tatatgattgatttaaaggaaactatttgcgttgatataggtaatccgcatgtagttatt
tttagtaagttagaacctcaagatcaaaaaattgtcggtgaaagattgcaggctaaggaa
ttattcgcagatggggtaaacgttaattttgctgaagtaaaagataataaaatctattta
tccgtttgggagcggggggcagggttaacgcttgcttgcggaagcggagcttgtggtagt
tttgctgccggtttaaagcacggttttatccattcaccaagtactatagtctttaagcac
ggtaaccttactatgaaagaagaaaacggtaatataataatgcaaggggcagctacgctt
gtagcacgtggggaatattattgtgagcaataa
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