Rickettsia rickettsii Hlp#2: RPK_04390
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Entry
RPK_04390 CDS
T01739
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rrp
Rickettsia rickettsii Hlp#2
Pathway
rrp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPK_04390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrp03400
]
RPK_04390
Enzymes [BR:
rrp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPK_04390
DNA repair and recombination proteins [BR:
rrp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RPK_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
nSTAND3
UvrD-helicase
AAA_11
AAA_19
CbiA
Motif
Other DBs
NCBI-ProteinID:
AFB29099
LinkDB
All DBs
Position
complement(761233..763179)
Genome browser
AA seq
648 aa
AA seq
DB search
MRIAKILLPVAKLFPLDYLIPEDLELNIGDLVVVPFRNKELTGIVWELVSNSEAKKIKTI
RAKVPLNLNITSEVLELIKWMSSYYMSELGSIAKLVLPMDIAEKPIKVKEQKVNNNFVLP
DLSEEQKQAVTILNESNKPTLVKGVTGSGKTEIYFHLIAYYLAKGKQVLVMLPEIALSTQ
IINRFIERFGFEPIIWNSSVTKAHKKMILRGILSDKVKVVIGARSSLFLPFKNLGLIVID
EEHDDSYKQDDGILYNARDTAIVRGTFDKAQIVLCSATPSIETIHNIEIGKYQLVTLVNR
YKNVDLPNIEIIDMTKEKLSKNSYLSKLLIEAIKGNLDNKKQVLLFLNRRGYAPLMLCKA
CGHRLTCKFCSSWMVVHKATKKLECHHCGYQSKIFSSCPECLEDETLTICGPGIERIEEE
AKALFPESKIAVISKDHAKSPEKIAQLLHQMENLEIDILIGTQIITKGYHFPNLTLVGVI
DADLGSNNADLRASERTFQLLHQVGGRAGRGDSKGVVYLQSYYPDNTIFSYVKAGDEDSF
FANELEIRKSADMPPFSKTASVILSGSSEAKILEIARDMVRIAPKANVKILGPASSLMSK
LAGKYRYRILIIADKKFNLQKYLKFWLSLIKIPSFCHLKIDIDPKSFY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagcaaaaatattattaccggtagcaaaattatttccgctagattatttaata
cctgaagatttagagctaaacataggtgatcttgttgtagtgccttttagaaataaggaa
ttaaccggcatagtatgggagcttgtttcaaattccgaggcaaaaaaaataaaaactatt
agagcgaaagtaccgttaaacttaaatattacttcagaagttttagaattaattaaatgg
atgagtagctactatatgtcagagcttgggagcatagccaagttagtattacctatggat
attgctgaaaaaccgattaaagttaaggagcagaaagtcaataataactttgtgctacct
gatttgtcagaagagcagaaacaagcagtaacaattttaaatgaaagtaataagccaaca
cttgttaaaggtgttacgggatcaggtaaaacagaaatatattttcatctaatagcatat
tacttagcaaaaggcaaacaagtgcttgttatgttgcctgaaattgctttaagtacacaa
attattaatcgttttatagagcgattcggttttgagcctatcatatggaactcaagcgtt
accaaagctcacaagaaaatgattttaagaggtatattaagcgataaagttaaagtagta
attggggctagaagtagtttgtttttaccttttaaaaatcttggtttaatagttatagat
gaggaacatgacgattcctataaacaagatgacggtatattatataatgctagggatacg
gctatcgtgagaggtacatttgataaagcacaaattgttttgtgttcggcaacaccgtct
attgaaacgatacataatatagaaattggtaaatatcaattggttacattggttaataga
tataaaaatgtcgatttgccaaatatagaaataatcgacatgactaaagaaaagctatct
aagaattcctatttatccaagcttcttatagaagctatcaaaggtaatttagataataaa
aagcaagtcttattatttcttaataggcgtggttatgctccgctcatgctatgcaaagct
tgcggtcacagattgacctgtaaattctgctcttcttggatggtagtacataaagcgact
aaaaaacttgaatgtcaccattgcggttatcaaagtaaaatttttagttcttgtcctgaa
tgtctagaggatgaaacattaactatctgtggtccaggtatagagagaatagaggaagaa
gcaaaagcactttttcctgagagtaaaattgcagtgataagtaaagatcatgctaaaagt
ccggaaaaaatagcacagcttctacatcaaatggaaaatttagaaattgatattttaata
ggcacacaaataataacaaaaggttatcactttccgaatcttactttagttggagtaata
gatgccgatcttggaagcaataatgccgatcttagagcatctgagcgaacttttcagcta
ctacatcaggtaggtggtagagcgggtagaggagatagtaaaggtgtagtatatttacaa
agctattatcctgataatacaatttttagttatgttaaagccggtgatgaagatagtttt
tttgcaaatgaacttgaaataagaaaatcagcagatatgccgccattttccaaaacagca
tcggtaattttgtcaggttccagtgaagctaaaattctagaaattgctagggatatggtc
cgaattgcaccaaaagcaaacgtgaaaattttaggaccggcaagctcattaatgtcaaag
ctcgctggtaaatatcgttaccgaatacttattatagccgataagaaatttaatttgcag
aaatatttaaaattttggctaagccttataaaaattccttctttttgccatctaaaaata
gatatcgatcctaaaagtttttattag
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