Rickettsia rickettsii Hlp#2: RPK_06295
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Entry
RPK_06295 CDS
T01739
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrp
Rickettsia rickettsii Hlp#2
Pathway
rrp00260
Glycine, serine and threonine metabolism
rrp00460
Cyanoamino acid metabolism
rrp00630
Glyoxylate and dicarboxylate metabolism
rrp00670
One carbon pool by folate
rrp00680
Methane metabolism
rrp01100
Metabolic pathways
rrp01110
Biosynthesis of secondary metabolites
rrp01120
Microbial metabolism in diverse environments
rrp01200
Carbon metabolism
rrp01230
Biosynthesis of amino acids
rrp01240
Biosynthesis of cofactors
rrp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rrp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPK_06295 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RPK_06295 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RPK_06295 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RPK_06295 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RPK_06295 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RPK_06295 (glyA)
Enzymes [BR:
rrp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RPK_06295 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
WD40_Prp19
DUF1815
DUF5770
Motif
Other DBs
NCBI-ProteinID:
AFB29409
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Position
complement(1059816..1061078)
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AA seq
420 aa
AA seq
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MNIFNNNLHETDKEINEIIKHEKLRQSSVIELIASENFVSPAVLEAQGALLTNKYAEGYP
SKRFYNGCEEVDKAENLAIERVKKLFNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMS
LDSGGHLTHGAAPNMSGKWFNAVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPR
NIDFAKFREIVDKVGAYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLI
LSNDEEIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASS
LQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSG
IRLGTPACTTRGFKEKDFVLVGHMVADILDGLKNNEDNSALEQQVLNEVTKLIELFPFYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttaataataatttacacgaaacggataaagagattaatgaaataataaag
catgaaaagctacgtcaaagtagtgtaatcgagcttattgcatcagaaaatttcgtaagt
cctgctgtgcttgaagctcaaggggcgcttctgactaacaaatatgccgaaggataccca
agtaagcgattctataacggttgcgaggaagtagataaagctgaaaatttagctatagaa
cgagtaaaaaaactctttaactgcaaatatgcaaatgtccaacctcattcaggatcacaa
gcaaatcaggctgtatatcttgctttattacagccgggtgatacggttcttggtatgtcc
ttagatagcggcgggcatctaactcacggtgcagcgcctaatatgtctggtaaatggttt
aacgccgtttcttatagcgtaaataaagagacttatttaatcgattatgatgagattgaa
cgcttagcggatttgcataaaccaaaattacttatagccggtttttctgcttatcctcgt
aatattgattttgcaaaatttagagaaatcgtggataaagtaggagcttactttatggca
gatattgctcatattgcaggacttgttgccacaggtgagcatcaaagccctattccttat
gctcacgctgttacctctactactcataaaacacttagaggtccaagaggcggtttaatt
ttatctaacgatgaagagataggtcacaaaataaattctgcattatttccaggactacaa
ggtggtccgttaatgcatataatagctgcaaaagccgtagcttttttagaaaatttgcag
cctgaatataaaagttatattcagcaggtaataagtaacgctaaagctttagcaagtagc
ttgcaagaaagaggatatgatatattaacaggtggtactgataatcatattgttttagtg
gatttgcgtaaagacggaatcactggtaagcttgccgcaaattctttggatagagcaggg
attacgtgtaataagaatgctatcccgtttgatgaaacttcgccttttatcacttcaggc
attcgccttggtactcccgcatgtactactagaggctttaaagaaaaggattttgtatta
gtcggtcatatggtagcagatattttagacggcttaaaaaataatgaagataatagcgct
cttgagcagcaagtattaaatgaagtgacaaaattaattgaattatttccgttttatggc
taa
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