Rickettsia rickettsii R: RRR_01475
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Entry
RRR_01475 CDS
T03663
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rrr
Rickettsia rickettsii R
Brite
KEGG Orthology (KO) [BR:
rrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrr03032
]
RRR_01475
03400 DNA repair and recombination proteins [BR:
rrr03400
]
RRR_01475
Enzymes [BR:
rrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RRR_01475
DNA replication proteins [BR:
rrr03032
]
Prokaryotic type
DNA Topoisomerases
RRR_01475
DNA repair and recombination proteins [BR:
rrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RRR_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJG32760
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Position
278418..281135
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AA seq
905 aa
AA seq
DB search
MTDKSSSNLVPVNIEDEMKVSYLDYAMSVIVSRAIPDVRDGLKPVHRRIIYSMHEAGNHA
NKPYRKSARIVGDVMGKYHPHGDSAIYDALVRMAQDFSLRLPLVDGQGNFGSMDGDAAAA
MRYTESRMAKVAYKLVEDIDKETVSFNPNYDGSEEEPSVLPAMFPNLLVNGSGGIAVGMA
TNIPPHNLGEVIDACCLYIDNNDIEILDLLEVVKGPDFPTGSMILGISGIRSAYLTGRGS
IIIRGRAEIENIGNSRQAIIITEIPYMVNKARLVEKIAQMVKEKRIEGISDLRDESNKNG
VRIFIELKKDVVAEVVLNQIYACTQLQTSFGVIMLALKDGLPKVMNLKEVIAAFVSFREV
VVTNRTIYLLNKARDRAHILLGLTIAVSNIDEIIRIIKASNDPNAAKQELMARQWEALNI
LPLVKLVDDKAMLNEQGKCNFTEVQAKAILEMRLQRLTAMEKNKLEEDLKNLTTEITEYL
NILGSRTRLLEILKEELIKVKEEFATPRLTSIEFGEFDQDIEDLIQREEMVVTVTLGGYI
KRVPLSSYRAQKRGGKGRSGLSMRDEDITTQVFVGSTHTPMLFFSNIGQVYSLKLYKLPL
SNPQGKGRPMVNILPLKANEHITNIMPLPENQDERDNLNIMFATAKGNIRRSDLLDFKKL
QSNGKIAIRLDEDDKLIDVKPCKEDEHILLATKAGKALRFPVESLRVIKSRTSDGVRGMK
LAKEDSVISMTVLKGISSTKEDRDAYLSVPWEQRLEIAKGEEFNPEELGVSLTAPAIVEM
ANSEEFILTVTENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDELML
ITNSGKLIRCKLESIRITGRNTSGVILFKLDDGEKVVSVSLIAETAEREEDSELEEEGLE
QSEDV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgactgataaatcttcttctaatttagtaccggtaaatatcgaagatgagatgaaagta
tcttatcttgattatgctatgagcgttatagtaagtagagctataccggatgttcgggac
ggcttaaagccggtacatcgccgaattatctattccatgcatgaagccggtaatcatgct
aataaaccttatagaaaatccgctagaatagtcggtgacgtgatgggtaaataccatccg
cacggcgatagtgctatttacgatgcgttagtacgtatggcacaagatttttccttgcgt
ttaccgcttgtagacgggcagggtaatttcggttcgatggatggtgatgcggcggcagca
atgagatataccgaatctcgaatggctaaagttgcgtataagctcgtagaggatatcgat
aaagagactgtcagctttaaccctaattacgatggttctgaagaagagccttccgtactt
cctgcaatgtttcccaatttattggtgaacggtagcggaggcattgcggtcggtatggca
actaatatcccgcctcataatcttggtgaggttatcgatgcgtgctgtttatatatagat
aataacgatatagaaatattagatttacttgaagttgttaaaggaccggattttcctaca
ggttcaatgattttaggcattagcggtattagatcggcatatcttactggtagaggtagt
atcattatacgaggtcgagccgagattgagaatatcggtaatagccgtcaagcaattatt
attaccgaaataccgtatatggtaaataaggcaaggcttgttgagaaaatcgctcaaatg
gttaaggaaaagcgtatagaaggtataagtgatttacgtgatgaatcgaataaaaacggt
gtaaggatttttattgagttaaagaaagacgtagttgctgaagtagtcttaaatcaaata
tacgcatgtactcagctacaaactagctttggtgttattatgcttgctcttaaagacggg
ttaccgaaagtgatgaatttgaaagaagtaattgcagctttcgttagttttagggaagta
gtagttactaaccgtactatatatttactcaataaagcaagagatagagctcatatttta
ctaggactaactattgccgttagtaatatcgatgaaataatacgtattattaaagcttca
aatgacccgaatgcagctaaacaagaattaatggctcgtcagtgggaagcattaaatatc
ctacctcttgtaaagttggttgatgataaagcaatgttaaacgagcagggtaaatgtaac
tttaccgaagtgcaagctaaggcaatcttagaaatgagattgcaacgcctgaccgctatg
gagaaaaacaagcttgaagaggatttaaagaacctcactacggaaatcaccgaatatctt
aatatacttggctctcgtacaaggttacttgaaattttaaaggaagagctcattaaagtt
aaagaagaatttgcgactcctcgtcttacttcaattgaatttggcgaatttgatcaagat
atagaagatttaattcagcgtgaagaaatggttgtaaccgtaacgcttggcgggtatatc
aagcgtgtacctctaagtagctatcgtgcgcaaaaacgtggcggtaaaggaagatcaggg
ctttcaatgcgtgatgaagatattaccacgcaagtttttgtcggtagtacccatactcct
atgttgttcttctcaaatatcggtcaggtttatagtttaaaactgtataaactgccttta
agtaatccgcagggtaagggtagaccgatggttaatatattaccgctgaaagcaaatgag
catattacgaatattatgccgctacctgaaaatcaggatgagagggataatttaaacatt
atgttcgcaactgccaaaggtaatatcagaagaagcgatttattagatttcaaaaagctt
cagtcgaacggtaaaattgctattaggcttgatgaggacgataaattaatagatgtaaaa
ccatgtaaagaagatgagcatattttacttgctaccaaagccggtaaagctttaagattc
cctgttgaatcgctgcgtgttattaagagccgtacttctgatggggtacgaggtatgaag
cttgccaaagaggattccgtaatttctatgactgtgcttaaaggtattagtagtacaaaa
gaggatagagatgcttatttatcagtgccgtgggagcagagattagagattgctaaaggt
gaggagtttaatcctgaagaacttggcgtaagcttaactgccccggctattgtagaaatg
gcaaattccgaagaattcattttaaccgtaactgagaacggttttggtaagagaagttca
gcttatggctatagaattactgaccgtggcggtagcggtataatcaatatggatattaac
gacaaaactggtttagtcgtcggtgttatgccggttaaaatggatgatgagttaatgctg
attaccaatagcggtaagttaattcgctgtaaacttgagtcaatacgtattacgggacgt
aatactagcggcgtaatcctatttaagctagatgatggtgaaaaagtcgtgtctgtctct
ttaattgctgaaactgctgaaagagaagaagatagtgagttagaggaagagggattagag
caatctgaagatgtgtaa
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