KEGG   Rickettsia rickettsii R: RRR_03160
Entry
RRR_03160         CDS       T03663                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rrr  Rickettsia rickettsii R
Brite
KEGG Orthology (KO) [BR:rrr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rrr03016]
    RRR_03160
Enzymes [BR:rrr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     RRR_03160
Transfer RNA biogenesis [BR:rrr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RRR_03160
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AJG33040
LinkDB
Position
complement(580826..581437)
AA seq 203 aa
MTIKIYQNDLPNNFTLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTA
PNVKALLLDKTRCKIFHFARFDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLC
RELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQLKDILQKMLLKENRYELAQDI
FRFLPIRANLDLIGWNEIDIFMH
NT seq 612 nt   +upstreamnt  +downstreamnt
atgactataaaaatttatcaaaacgacctacctaataattttacacttgaaggagatcta
gctatagataccgaaacaatgggactaaatctccatagagataaactatgtttgctacaa
tttagtaacggcaatggtgaagctcatcttgtgcattttacaaatcaagattatacagct
cctaatgtaaaagcattattactagataaaactagatgtaagatatttcattttgctaga
tttgatctagcatccataaaaaaatatttaagtatagatttagaaaatatcttttgtact
aaaatatcttcaaaactagttagaacttataccgatagtcatgggcttaaggatttgtgc
cgagaattgcttaatataaatatttcaaaacaacaacaatcttcctattggggtgcggat
aatttatcttcagaacaaaaagaatatgcagcaaaagatgtgctttatttgcatcagtta
aaagatattttacaaaaaatgctacttaaagaaaataggtatgaacttgcccaagatatt
ttccgttttttaccgataagagctaatttagaccttatcggttggaatgaaattgatatt
ttcatgcattaa

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