KEGG   Rickettsia rickettsii R: RRR_03310
Entry
RRR_03310         CDS       T03663                                 
Name
(GenBank) Pmetallo-beta-lactamase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rrr  Rickettsia rickettsii R
Pathway
rrr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rrr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RRR_03310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rrr03019]
    RRR_03310
Messenger RNA biogenesis [BR:rrr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RRR_03310
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 DUF826
Other DBs
NCBI-ProteinID: AJG33068
LinkDB
Position
602012..603694
AA seq 560 aa
MSSFNIKNHKNDLLFVPLGGSNEIGMNLNLYHYQGQWLMIDCGSGFADDYLPGVDMIIAD
SSFIEKYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYSTTFTANFLKIRLNEYDFAKN
IKIHEVKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKK
ADEELLKFYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNL
ARLDTIIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVI
ATGCQGEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVI
TERDHFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVEN
GSVVLLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGL
LAANPMLSMPGLLDPKEDMALVNLIKNHIKELVTIQNKQAKKALSDEQVIEAIKGTIRKT
LKQEINKSPVIIVNLEKAVE
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgtcatcattcaacatcaaaaatcataaaaatgatctgctatttgtaccgctagggggc
tctaatgaaataggtatgaatcttaatctttaccattatcaaggtcaatggttaatgatt
gattgtggtagcggttttgccgatgattatttacccggtgttgatatgataattgctgat
agcagctttatcgagaaatataaaaaagatatagtaggtctgattttaactcatgctcac
gaggatcatttaggtggagtccaatatttatggaatagacttaaatgtcctatttatagt
actacttttacagcaaattttctaaaaattcgtttaaatgaatatgattttgctaaaaat
ataaaaattcatgaagtaaaacccggtagtaaaataaatctagatcctttttccttagag
atggtgccactgactcactcggctcctgaaatgcaagcaattatgatccgtacggatgca
ggtaatattttacatacgggggattggaaatttgataacgatccgatacttgggaaaaaa
gccgatgaggagcttttaaaattttacggagatgaaggggttcttgcacttgtttgtgat
tcaactaacgtatttaataaaggaagctcaggttctgagggggatgttagaaaaagttta
gtagatattatagccggttgtcctcaaatggtagtagtttcaacctttgcctctaattta
gcacggcttgatacaataattcatgctgcagggcttgcgggtagaaaagtagtcttaacc
ggtagaagtttgcaccgtatgatgcttgctgcgcaggaaagcggctatttgaaagatatt
gctcctctaattagtgaacgtgatgttagcagatttagaagagaagaattattagtaatt
gctaccggttgtcaaggtgagcctatggctgctaccgcaaaactggctagtaattctcat
ccgtctataaagcttgttcctaaggatacaatgattttttcttcaaaaattattccgggt
aatgaaaagaaaatattcaggctatttaatatatttgttaaggccggtgtagaagttatt
acagagcgagaccattttgtacatgtttcaggacatccatcgattgacgagctacaaaaa
atgtattctctaattagaccgaatatttgtatacctgttcacggcgagcctgtacatatt
catgaacatgttaagcttgctaagaaaaacggcataaaacaggtagtagaggttgaaaat
ggtagtgtagtactgcttgaacctaataatgcaaaagtaatttcaaaggttgaaaacggt
tatttagctgttgacggtaattatttgctgcccgttgaatctccgattttcaaagctaga
agacgtatgcgtgagtcgggtatcgtggtagcatcagtagtcattaataaaaaaggactg
cttgctgcaaacccaatgctgtctatgcccgggctgcttgatccgaaagaggatatggca
ttagttaacctcattaaaaaccacattaaagaacttgtgaccattcaaaataaacaggct
aaaaaagcattgtcggatgaacaagtaatcgaggcaataaaaggaacaatccgtaaaacc
ttaaaacaagaaattaataagtcacccgttataatagtaaatcttgagaaagctgtggag
tag

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