Rickettsia rickettsii R: RRR_03310
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Entry
RRR_03310 CDS
T03663
Name
(GenBank) Pmetallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rrr
Rickettsia rickettsii R
Pathway
rrr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RRR_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrr03019
]
RRR_03310
Messenger RNA biogenesis [BR:
rrr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RRR_03310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF826
Motif
Other DBs
NCBI-ProteinID:
AJG33068
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Position
602012..603694
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AA seq
560 aa
AA seq
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MSSFNIKNHKNDLLFVPLGGSNEIGMNLNLYHYQGQWLMIDCGSGFADDYLPGVDMIIAD
SSFIEKYKKDIVGLILTHAHEDHLGGVQYLWNRLKCPIYSTTFTANFLKIRLNEYDFAKN
IKIHEVKPGSKINLDPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPILGKK
ADEELLKFYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNL
ARLDTIIHAAGLAGRKVVLTGRSLHRMMLAAQESGYLKDIAPLISERDVSRFRREELLVI
ATGCQGEPMAATAKLASNSHPSIKLVPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVI
TERDHFVHVSGHPSIDELQKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQVVEVEN
GSVVLLEPNNAKVISKVENGYLAVDGNYLLPVESPIFKARRRMRESGIVVASVVINKKGL
LAANPMLSMPGLLDPKEDMALVNLIKNHIKELVTIQNKQAKKALSDEQVIEAIKGTIRKT
LKQEINKSPVIIVNLEKAVE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattcaacatcaaaaatcataaaaatgatctgctatttgtaccgctagggggc
tctaatgaaataggtatgaatcttaatctttaccattatcaaggtcaatggttaatgatt
gattgtggtagcggttttgccgatgattatttacccggtgttgatatgataattgctgat
agcagctttatcgagaaatataaaaaagatatagtaggtctgattttaactcatgctcac
gaggatcatttaggtggagtccaatatttatggaatagacttaaatgtcctatttatagt
actacttttacagcaaattttctaaaaattcgtttaaatgaatatgattttgctaaaaat
ataaaaattcatgaagtaaaacccggtagtaaaataaatctagatcctttttccttagag
atggtgccactgactcactcggctcctgaaatgcaagcaattatgatccgtacggatgca
ggtaatattttacatacgggggattggaaatttgataacgatccgatacttgggaaaaaa
gccgatgaggagcttttaaaattttacggagatgaaggggttcttgcacttgtttgtgat
tcaactaacgtatttaataaaggaagctcaggttctgagggggatgttagaaaaagttta
gtagatattatagccggttgtcctcaaatggtagtagtttcaacctttgcctctaattta
gcacggcttgatacaataattcatgctgcagggcttgcgggtagaaaagtagtcttaacc
ggtagaagtttgcaccgtatgatgcttgctgcgcaggaaagcggctatttgaaagatatt
gctcctctaattagtgaacgtgatgttagcagatttagaagagaagaattattagtaatt
gctaccggttgtcaaggtgagcctatggctgctaccgcaaaactggctagtaattctcat
ccgtctataaagcttgttcctaaggatacaatgattttttcttcaaaaattattccgggt
aatgaaaagaaaatattcaggctatttaatatatttgttaaggccggtgtagaagttatt
acagagcgagaccattttgtacatgtttcaggacatccatcgattgacgagctacaaaaa
atgtattctctaattagaccgaatatttgtatacctgttcacggcgagcctgtacatatt
catgaacatgttaagcttgctaagaaaaacggcataaaacaggtagtagaggttgaaaat
ggtagtgtagtactgcttgaacctaataatgcaaaagtaatttcaaaggttgaaaacggt
tatttagctgttgacggtaattatttgctgcccgttgaatctccgattttcaaagctaga
agacgtatgcgtgagtcgggtatcgtggtagcatcagtagtcattaataaaaaaggactg
cttgctgcaaacccaatgctgtctatgcccgggctgcttgatccgaaagaggatatggca
ttagttaacctcattaaaaaccacattaaagaacttgtgaccattcaaaataaacaggct
aaaaaagcattgtcggatgaacaagtaatcgaggcaataaaaggaacaatccgtaaaacc
ttaaaacaagaaattaataagtcacccgttataatagtaaatcttgagaaagctgtggag
tag
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