Rickettsia rickettsii R: RRR_05085
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Entry
RRR_05085 CDS
T03663
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rrr
Rickettsia rickettsii R
Pathway
rrr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rrr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RRR_05085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrr03021
]
RRR_05085
03400 DNA repair and recombination proteins [BR:
rrr03400
]
RRR_05085
Enzymes [BR:
rrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RRR_05085
Transcription machinery [BR:
rrr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RRR_05085
DNA repair and recombination proteins [BR:
rrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RRR_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
AJG33351
LinkDB
All DBs
Position
complement(917808..918830)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNNYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGAVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTEADMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENMQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagttgcttatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacgtctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcagaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gagacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aataattatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaaaagtgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgctgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaagccgatatgctaagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatatgcaggaattatctaaacgttatgaagattcttataat
taa
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