Rickettsia rickettsii R: RRR_06180
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Entry
RRR_06180 CDS
T03663
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rrr
Rickettsia rickettsii R
Pathway
rrr03030
DNA replication
rrr03430
Mismatch repair
rrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RRR_06180
03430 Mismatch repair
RRR_06180
03440 Homologous recombination
RRR_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrr03032
]
RRR_06180
03400 DNA repair and recombination proteins [BR:
rrr03400
]
RRR_06180
Enzymes [BR:
rrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RRR_06180
DNA replication proteins [BR:
rrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RRR_06180
DNA repair and recombination proteins [BR:
rrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RRR_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJG33527
LinkDB
All DBs
Position
complement(1095106..1098651)
Genome browser
AA seq
1181 aa
AA seq
DB search
MRPEFIHLRTQSSYSFLESALTIEKVVELASSNKMPAICLADKGNLFGSLEFALCAVKKG
LQPIHGVILNIKYDIDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHINFEDLIE
YQEGLIGLCCYTDGIVGKCLLARNEEQAMLFARKLQEILGDRFYFEIMRHELPEEQFIED
SYIRIAAELAIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYLDRKTVSENCYFRSPH
EMIELFSDLPSAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIKKDATEGLLARL
AAKFKSENIALENQEALKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVSLEQAMREV
PELANAAKGNGLYNLDGEAELIKLVIDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDSNSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAIANNISESQAKSIFATVAKFAGYGFNKAHAASYGVISYQTAYLKANYPAE
FLVACLNLELNNHDKINLFLQEAKDNGIKIIAPNINISEGYFSVQFSDTVIPHSVKPVIP
RLDRGIQEISKDTVVKPRYNIAGAIIFALGAIKGVTPNFGKLVTDERKARGAFKSITDFI
ERLPPKSINSKLLENLIKSGCFDELHDNRLQLLSSIPKLLSYSTAYHEEQESNQFSLIKV
SSLSPTILVSSDYADKNTLAFYEFEAMGLFISNHPLTEYQEIFSRLNILNTADLHNNLPD
GTNRVNLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLDVKSLVV
VNCDIVKDEGGIKLTAKSFSSIEDAINNKQFELQFYPQNHEELRQIVNLLAARINNEDQS
NAKATIYLQSADVKNFVAKITLPEKFLLQGQDFEILKGYSK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgattgagaaggtagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataagggaaatttattcggctcattagagtttgcattatgtgcagtaaaaaaagga
ctgcagccgatacacggagttattctaaatataaaatacgatatagatatttttgctcaa
attttgcttatagctaaagatgaaactggttataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagatatgcgatcatattaattttgaagatttaatcgaa
tatcaagaaggattaataggattatgctgttataccgacggtattgtcggaaaatgcttg
ctagctcgcaacgaggagcaagcgatgctgtttgcacgtaaattacaggaaattttagga
gatcgtttttactttgagattatgagacatgagctaccggaagaacagtttattgaggat
agttatattagaattgctgccgagcttgctattccgcttgttgctactaataaagttttg
tttagtgagaaaagcatgcatgatgcacatgatgtattgttatgtatatcagccggtgtt
actaaagaatatctggatcgaaaaacagttagcgaaaattgttattttagatcaccgcat
gagatgatagagcttttttccgatttacctagtgccatccaaaataccgtgaatttaaga
gagcgttgttattttgccgcacatgcaaacccgccgatgctgcctaattttgccaccaaa
gatattagtgaaacggatttaattaaaaaagatgcaacagaagggttgcttgcaaggctt
gctgcaaagtttaaatctgaaaatattgcgttagagaatcaagaagcattgaaaaccgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatcggattttattaaatggagtaaaaaagaggggattttagtcggaccg
ggtagaggatcgggagcaggctcggttgttgcttggagcttgcttattactgatcttgat
ccgattaaatttggcttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gattttgatattgatttttgtcaggaaaggcgtgaggaagtaattaattacgtacgttcc
aaatacggtaataatagagtaggacagattataactttcggtaagatgcaggcaaaggct
gtaattaaggatgtcgctcgtgtgcttagcttaccttataaattcgctgattatctaacg
gagcttgtcccttttagtgcagttaatccagttagcttagaacaggcaatgcgtgaagtt
ccggagcttgcaaatgccgctaaaggtaatgggttgtataatttagatggtgaagcggag
ttaattaagttagtgattgatacttcgttaattcttgaggggctgcataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagattctaactccgatatgctggtagtcggttattctatgaaatattccgagattgcc
ggtttaattaaatttgattttttagggctacaaaccctaacggttattaccgattgtaag
aaactgcttaaagagcaagggatagaagtagattttaacaatatgacgtttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtaggcgttttccaatttgaaagtatc
gggatgaaagatgcacttagacgccttaaacctgattctatacatgatttgatagctctt
ggtgcgttataccgtcctggtcctatggaaaatattcctacctatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctattgaaaccaatcttagaagaaacttac
ggagtggtgatatatcaggagcaggtacaaagaattgctcaggttcttgcaggttatacg
ctaggagctgccgatttacttcggagagcaatgggtaagaagataaaaaaagaaatggag
gagcaggaagaaatttttgttaaaggagcaattgctaataatatttcagaatctcaagct
aaatccatttttgcgaccgtggctaaatttgccggatacggttttaataaggcacatgct
gcgtcttacggtgttatttcataccaaactgcatatcttaaagctaattatcctgctgaa
tttttagtagcatgcttaaatcttgaattgaataatcacgataaaattaatttattttta
caagaagcaaaagataacggcataaaaattattgcacctaatattaatatttctgaaggg
tattttagtgtacagttttcggacactgtcatcccgcatagcgtaaagcctgtcataccg
cgacttgatcgtggtatccaggaaatttcaaaagataccgtggtcaagccacggtataac
atcgcgggtgcaataatcttcgccttaggtgctattaagggagttacgccgaatttcggt
aagttagtaacggatgagcgaaaagcaagaggggcgtttaaatcaattactgattttatt
gaaagattacccccaaaatctattaacagtaaattattggaaaatttaatcaagtcaggc
tgttttgatgagctgcatgataatcgattgcaattattgtcaagcattccaaaattgctt
tcttattcaactgcatatcacgaagagcaggaatctaatcaatttagcttaattaaagtt
tctagtttaagtccaactattttagtatcaagcgattatgccgataaaaatactttagcc
ttttatgaatttgaggctatgggtttatttatctctaatcatcctcttacggaatatcaa
gaaatatttagtcgtttaaatattttaaatactgcggatttgcataataacttacctgat
ggtactaaccgagtaaatcttgccggtgtaatacaaaaaaaggattcccgtatgtcggca
agaggtaggtttgtgacgctcgtgctttccgatcctgagaatatctttgaacttagtatt
tttagtgaggaagttttaaaagattatgtacatttacttgatgttaaaagtttggtagtt
gttaattgtgacatagttaaagatgagggaggaataaaactaacggcaaaaagcttttca
tcaattgaggatgcaattaataataaacaatttgaactacagttttatccacaaaatcat
gaagaattacggcagatagtaaacttgcttgcagctcgtataaataatgaagatcagagt
aatgctaaagctacaatctatttacaaagcgcagatgtaaagaattttgtagcaaaaatt
acattacctgaaaaattcttgctccaagggcaagattttgagattttaaaaggatatagt
aaatag
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