Roseiflexus sp. RS-1: RoseRS_0235
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Entry
RoseRS_0235 CDS
T00542
Name
(GenBank) aconitase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00020
Citrate cycle (TCA cycle)
rrs00630
Glyoxylate and dicarboxylate metabolism
rrs00640
Propanoate metabolism
rrs00720
Other carbon fixation pathways
rrs01100
Metabolic pathways
rrs01120
Microbial metabolism in diverse environments
rrs01200
Carbon metabolism
rrs01210
2-Oxocarboxylic acid metabolism
rrs01230
Biosynthesis of amino acids
Module
rrs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rrs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
rrs_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RoseRS_0235
00630 Glyoxylate and dicarboxylate metabolism
RoseRS_0235
00640 Propanoate metabolism
RoseRS_0235
09102 Energy metabolism
00720 Other carbon fixation pathways
RoseRS_0235
Enzymes [BR:
rrs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
RoseRS_0235
4.2.1.99 2-methylisocitrate dehydratase
RoseRS_0235
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Gene cluster
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Motif
Pfam:
Aconitase
Aconitase_C
LisH_TPL
DUF5899
Motif
Other DBs
NCBI-ProteinID:
ABQ88671
UniProt:
A5UPW8
LinkDB
All DBs
Position
complement(289732..292491)
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AA seq
919 aa
AA seq
DB search
MSDTLHDPFGARAPLAVGGRTFLIYRLDALARRSGVDLDRLPFSIKVLLEALLRNVGDGF
TTVDDVIALAQWTPASAGQREVAFKPARVLMQDFTGVPAVVDLAAMRDAMARLGGDPAKI
NPLVPADLVIDHSVQVDAFGHGMALALNAQLEFERNRERYEFLRWGQQAFANFRVVPPAT
GICHQVNLEYLATVVIAREIDGELVAIPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAVL
LGQPLAMLTPEVVGVKLTGALRPGATATDLVLRVTEMLRRHGVVDKFVEFCGPGLSSLSL
ADRATIANMAPEYGATCGFFPVDAETLAYLRSTGRSEDLVALVEAYCREQGLFRTDDTPI
PTFNTLLELDLSTVEPSVAGPRRPQDRVPLADLKPSFNQAMRQVFGRDVPVYEGNGARKR
ERHDLYAASRIPVTLNGRTTSITHGSTIIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLS
VPPYVKTSLAPGSRVVSEYLAQSGLQAYLDRLGFNVVGYGCTTCIGNSGPVADEIARAVK
EGNLVVSAVLSGNRNFEGRINPVVRANYLASPPLVVAFAIAGTVDIDVNREPLGVGADGE
PVYLADIWPTAEEVAEVMAASLNADLFRAQYANVFTGNETWNAIPVSGGDLYAWNPDSTY
IQNPPYFHDMTRDVPPLSSIRGARVLALLGDSVTTDHISPAGSIAKDSPAGQYLIARGVQ
PADFNSYGARRGNHEVMMRGTFANIRLRNAMVPGVEGGYTVYLPTGERMSIYDAAMRYQA
DGTPLIVLAGKEYGTGSSRDWAAKGTFLLGVRAVIAESFERIHRSNLVGMGVLPLTFMPG
ESWQSLGITGSEIFTIEGIETLRPGQELTVHAQRPDGSALTFRVKARINSEGELTYYRHG
GILHYVLRQLAEQEEPAAV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccttgcacgacccgttcggcgcgcgcgcgccgctggcagttggcggtcgc
acctttctgatctaccgtctcgacgcgctggcgcgacgcagcggcgtcgatctggatcgc
ctgccgttttcaatcaaagtgctgttggaagcgcttttgcgcaatgttggtgatggtttt
acgacggttgacgatgtgatcgcgctggcgcagtggacgcccgccagcgccgggcagcgc
gaggtggcattcaagccggcgcgcgtgctgatgcaggatttcaccggtgttccggcagtg
gtcgatctggcggcgatgcgtgacgcgatggcgcgtctggggggtgaccctgcgaagatc
aatccgctcgtgcccgccgacctggtgatcgaccattcggtgcaggtcgatgcgtttggt
cacggaatggcgctcgcgctcaacgcccaactcgagtttgagcgcaaccgcgagcgctat
gagttcctgcgctgggggcaacaggcattcgccaacttccgcgtcgtgccgcctgccacc
ggcatctgccaccaggtcaacctggaatacctggcaaccgtggtcattgcgcgcgagatt
gacggcgaactggttgcaataccggatacccttgtcggcaccgacagccacacgaccatg
atcaacggtcttggagtcctgggatggggcgtcggcgggatcgaagccgaagcggtgctc
ctgggtcagccgctggcgatgctgacccccgaagtcgttggcgtgaagttgaccggtgcg
ctccgccctggcgcaactgcgaccgacctggtgctgcgggtgaccgagatgctgcgtcgg
cacggcgtggtggataagttcgtggagttctgcggtccggggttgagttcgctcagcctg
gcggatcgcgccaccatcgcaaatatggcgccagagtatggcgcaacctgcgggttcttc
ccggtcgatgccgagaccctcgcctacctgcgcagcaccgggcgctctgaggacctggtg
gcgctggtggaagcgtactgccgcgagcaggggctgttccgtaccgacgacacccccatt
ccgacgttcaatacgctcctggaacttgacctgagcacggtcgaaccgagtgtcgccggt
ccgcgtcgtccccaggatcgcgtgccgctggcggacctgaaaccgtcattcaaccaggcg
atgcgccaggtcttcgggcgtgatgtgccggtttacgaaggaaatggcgcacggaagcgc
gaacgacacgatctgtacgctgcgtcgcgcatacccgtgaccctgaacggacgcacgacg
tcgatcacacacggctcgacgatcattgccgcgattacatcctgcaccaacacctcgaac
ccatcggtgatgatcgccgccggattgctggcgaagaaggcggtcgagaagggactgagc
gtcccgccctatgtcaaaaccagtctggcgccggggtcgcgggtggtgagcgaatacctg
gcgcagtccgggttgcaggcatatctcgaccggttagggttcaacgtcgtcgggtatggt
tgcaccacctgtatcggcaacagtggacctgtcgccgacgagatcgcgcgggcggtcaaa
gaggggaatctggtggtcagcgcagtgctgagcggcaaccgcaatttcgaggggcgcatc
aacccggtggtgcgcgccaactacctggcgtcgccgccgctggtcgtcgcctttgccatc
gccggaacagtggacatcgacgtgaaccgtgagccgctcggcgtcggcgccgatggcgaa
ccggtctacctggcggacatctggcccaccgcagaggaagtcgccgaggtgatggccgca
tcactcaacgccgacctgttccgtgcgcagtatgcgaacgtgttcaccggcaacgagacc
tggaacgccatcccggtgagcggcggcgatctctacgcctggaatccagactcgacctac
atccagaatccgccgtacttccacgatatgacgcgcgacgttccaccattgtcatcgatc
cgtggcgcgcgcgtgctggcgttgctgggcgacagcgtcacgaccgaccacatttcgcca
gccggaagcatcgccaaagacagtccggcggggcagtacctgatcgcccgcggcgtgcaa
ccggcggatttcaactcctacggcgcgcgtcgcggcaaccacgaagtcatgatgcgcggc
acgttcgccaacatccgtctgcgcaacgcgatggttccgggtgtcgaaggcggatacacc
gtctacctgccgaccggcgagcgaatgagcatctacgatgccgcgatgcgttaccaggcg
gacggtacgccgctgatcgtgctggcgggcaaggaatacggcaccggctcctcgcgcgac
tgggcggcgaagggcacgttcctcctcggcgtgcgcgcagtgatcgccgagagtttcgag
cgcatccaccgctcgaacctggtgggcatgggggtgctgccgctgaccttcatgccgggc
gaaagctggcagtcgctcggcataaccggcagtgaaatctttacgatcgaagggatcgaa
acgctgcgtccgggtcaggagctgaccgtgcatgcgcagcgacccgacggctcagcgttg
acgttcagggtcaaagcgcggatcaactcagaaggcgaactcacctactaccggcacggc
ggcatcctgcactacgtgctgcgtcaactggcggaacaggaagaaccggcggcggtgtga
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