Roseiflexus sp. RS-1: RoseRS_0494
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Entry
RoseRS_0494 CDS
T00542
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RoseRS_0494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrs02000
]
RoseRS_0494
Transporters [BR:
rrs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RoseRS_0494
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_25
AAA_22
DUF87
Mrx7
DLIC
Motif
Other DBs
NCBI-ProteinID:
ABQ88918
UniProt:
A5UQL5
LinkDB
All DBs
Position
complement(625985..627820)
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AA seq
611 aa
AA seq
DB search
MAGAQFDDDEILGKAYDATLVRRLGVFVAPYWRRLALATALMFGGAAVELAPPFLVKQAI
DGPIAARDPSGVLPIFGVYIVALLTAFGFRYGQTYIVQSVGQQVMVDIRTRIFSHIQRMS
LAFFDRNPVGRLITRLTNDVDALNEFITQGTVALLGDLVRLLFIVITMLLLNWRLALISF
IMFPAVMLASSVFQRIMRTIYRRVRQRIARINAFLNEQISGVLITQLFNREEQSRIRFAE
LSRDYLAAQLQSNRTFAVFFPLINFLSVTAMALLLYFGGQAVLADVATLGMLVAFIQYTD
QAFQPIRQIAERYNTFQSAMASAERIFRVLDTPATVVDPEHPRALPTPVRGEIAFKDVWF
TYDTDAAGPDGFGLTDTDDRWVLRGISFTIPAGQAVAVVGATGAGKTSLVSLMARFYDIQ
RGSITLDGIDIRDLRQTDLRRHVSAVPQDPVCFSGSIASNIRLHDESISDEQVRRAAEIA
CAAPFIERLPGGYDYEVRERGSNLSVGQRQLLAFARAIAFNPEVLLILDEATSSVDTETE
GLIQEALERMIKGRTSIVIAHRLSTIRHVDRILVLHKGRLAEDGSHDELLAKRGYYYRLY
QLQFAGELKKN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgcacagttcgatgatgatgaaatccttggaaaggcatacgacgcgaccctg
gtgcgtcgtctgggtgtctttgtcgcgccgtactggcgtcgactcgcactggcgacggcg
ctgatgttcggtggcgcagcggtggaactcgctccgccattcctggtcaaacaggcaatc
gacggtcccatcgcggcgcgcgacccatccggcgtgttgccgatcttcggggtgtacatc
gtggcgctgctgactgcattcggcttccgctacggtcagacctatattgtccaatcggtc
gggcagcaggtgatggtcgacatccgtacccgtattttcagccacatccagcgtatgagc
ctggcattcttcgaccgtaacccggtcggacgattgatcacccgcctgacgaacgatgtc
gatgcgctgaacgagtttatcacgcagggaacggtggcgctgcttggtgatctggtgcgc
ttgctgttcatcgtgatcaccatgctgctgctgaactggcggctggcgctgatcagtttc
atcatgtttccagcggtgatgctggcgtccagtgtgtttcaacgcatcatgcgaaccatc
taccggcgcgtccggcaacgtattgcgcggatcaatgcctttctgaacgaacagatcagt
ggggtgctgatcacgcaactgttcaaccgcgaggaacagagtcgcattcgttttgcggaa
ctgagccgtgattacctggcggcgcagttgcagtcgaaccgaaccttcgcggtctttttc
ccactcattaatttcctctcggtgacggcaatggcgctgctcctctactttggcgggcag
gcggtgctggcagacgtggcgacgctcggtatgctggttgcgttcattcagtataccgac
caggcattccagccgatccgccagatcgctgaacgctacaatacattccagtcggcgatg
gcatcggcggaacggatattccgggtgctcgacacgcctgcaacagtcgttgatccagag
catccgcgcgcattgccgacaccggtgcgcggtgagatcgcatttaaggatgtatggttc
acttacgacaccgatgctgccggacccgatggattcgggttgacggataccgatgaccgc
tgggtgctgcgcggcatctcgttcaccatcccggcaggacaggcagtggctgtggtgggg
gcgaccggcgcgggcaaaacatcgctcgtcagcctgatggcgcgcttttatgacattcag
cgcggttcgatcacacttgacgggatcgatatccgcgacctgcgccagaccgacctgcgc
cggcacgtcagcgcggtaccacaagacccggtgtgtttcagcggttccatcgcctcgaat
atccgcctgcacgacgagagcatcagtgatgaacaggttcgccgcgctgcggagattgcg
tgcgcagcgccgtttatagagcggttgccgggtggctatgattacgaagtgcgtgaacgc
ggcagcaatctgtcggttggacagcgacagttactggcgtttgcccgcgcaattgcgttc
aaccccgaagtgctgctcattctcgacgaagccacatcgagcgtcgataccgaaacggaa
gggttgatccaggaagcgttggagcgtatgatcaaggggcgaaccagcatcgtcattgcg
catcgcctctcgacgatccgccacgtggaccggattctggtgctgcacaaggggcgcctg
gcagaagatggctcgcacgacgaactgctggcgaagcgcggttattactaccgtctgtat
cagctccagttcgcgggggaactgaaaaagaattaa
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