Roseiflexus sp. RS-1: RoseRS_0524
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Entry
RoseRS_0524 CDS
T00542
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrs03000
]
RoseRS_0524
Transcription factors [BR:
rrs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RoseRS_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
MerR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ABQ88948
UniProt:
A5UQP5
LinkDB
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Position
657556..658575
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AA seq
339 aa
AA seq
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MQATIKQVAQRAGVSVATVSYVLNGTGVVTDETRQRVLDAVAELNYQPQHAARSMRGRSR
TLGVTLSALPGRLAEPALTEVLAGVADAAALRGYFLLLATAGADQDETELCLSLARTRRV
DGLVLFDMLVDDPRAQALAGAGIPHVCAGPPPAGIDSPSVAIDMHTAAVDAVRHLLGLGH
RRIGLIQPPSELAVSEPIVEGYRQALTEAGLPFDPTLVVESGRAEEDGYQAMTELLASPK
PPTAVLAGSDELAFGAMHALNDAGLIVGRDVSLVGFDDLPQAAHVNPPLTTLRQPRRVQG
QQLAMLLDDVILKRNTSLRTVTLSARLIVRRSSGPAPVS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgatcaaacaggttgcgcagcgggctggcgtatcggttgccactgtgtcg
tatgtgctcaacggcaccggtgtggtgacggacgaaacacgccagcgggtgctcgatgcc
gtcgctgaactcaactatcaaccgcagcacgcagcgcgtagcatgcgtggtcgaagtcgc
acgctcggcgtgacgctgtctgcgctgccagggcgtctggcggaaccggcgctgaccgag
gtgttagccggtgtggcggacgccgccgctctgcgtggctactttttgctgctggcaacg
gctggcgcggatcaggatgagacggaattgtgcctgagcctggcgcgcaccagacgggtt
gatgggctggtgttgtttgacatgctggtggatgatccgcgtgcgcaggcgctcgccggg
gcaggtattccgcatgtgtgcgccggtccgcctccggcaggcattgatagcccctcagtt
gccatcgatatgcacaccgcagccgttgatgccgtgcgccatctgctcggtctggggcat
cggcggatcggcttgatccagcccccttcggaactggcggtgagtgagccgattgtcgaa
gggtatcggcaggcgttgaccgaagcaggtctgccgttcgacccgacgctggttgtcgaa
tcggggcgcgcggaggaagatggctaccaggcaatgactgagttgctcgcatctcccaaa
ccgccaaccgctgtgctggcgggaagcgacgaactggcgtttggcgctatgcatgcgctc
aacgacgctggtctgatcgttgggcgcgatgtgtcgctggtcgggtttgatgatcttcca
caggcggcgcatgtgaatccgccgctgacgacgctgcgccagccgcggcgtgtgcagggt
caacaactggcaatgctgctcgatgatgtgattttgaaacgcaataccagtttgcgcacg
gtaacgttgagcgcgcgcctgatcgttcgcaggtcgagcggcccggcgcctgtatcgtag
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