Roseiflexus sp. RS-1: RoseRS_0531
Help
Entry
RoseRS_0531 CDS
T00542
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrs03009
]
RoseRS_0531
Enzymes [BR:
rrs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RoseRS_0531
Ribosome biogenesis [BR:
rrs03009
]
Prokaryotic type
ribosomal protein modification factors
RoseRS_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABQ88955
UniProt:
A5UQQ2
LinkDB
All DBs
Position
665005..666423
Genome browser
AA seq
472 aa
AA seq
DB search
MKFHIITLGCPKNQVDSEGMSSILAAQGHTPVAHADDADVVVVNTCSFIAAAREETLDVL
REVAARKTPGQYLVAAGCMAESHSALVAAAPGVDALLSTREWMRIGDVVDTLQREPAVAA
SSAAREIIPLSSAPASSDDLRVPGAYADWRTAPIRRRITGPSAYLKISDGCNLRCAFCTI
PSFKGDMRSKAVGAILGEAQELADAGVKEIVLVAQHLTDYGRDLGLKDGLALLLDELCAV
LPKDRWVRLMYAYPHGISERLIATMARHPQICHYLDMPLQHAHPETLRRMHRPPDSDRTR
RLIADLRAAMPDIALRSTFIIGFPGETSAEFRALTAFLEEVQFDRVGVFRYSREPGTPAA
ALPDQIPQRVIERRWHTIMRLQQGISRQRNRRWVGRVIRVLVEGQGQTDDGRLLSVGRSF
RDAPEVDGQVLFWGTAATGTFVDVRVTQALDYDLWGEMVEAPADDARSENGT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcatattattacccttgggtgtccgaaaaatcaggttgatagcgagggcatg
agcagcattctggcggcacaggggcatacgccggtcgcacatgccgacgatgccgatgtg
gtcgtcgtgaatacctgttccttcatcgctgcggcgcgggaagagaccctcgacgtgctg
cgtgaagtcgctgcccgcaaaacgcctggtcaatacctggtcgcagccggttgtatggca
gaaagccacagcgcgcttgttgcggcagcgcccggggtcgatgcgctgctcagcacccgc
gagtggatgcgcatcggggacgtggtcgacacccttcagcgtgaaccggcggtcgctgca
tcctcggcagcgcgcgagatcattcctctctccagcgctcccgcctcgtccgacgatctg
cgcgtccctggcgcatacgccgactggcgtaccgcgccgatccgtcggcgcattaccggt
ccctcggcgtatctgaagatttccgatgggtgcaatcttcgctgtgcgttctgcaccatt
ccgtcgttcaaaggcgatatgcgctccaaagcggtaggggcgatccttggcgaagcgcag
gaactggcagacgccggggtgaaagagatcgtgctggtggcgcagcacctgaccgactac
gggcgcgatctggggttgaaggacggtctggcgctgttgctcgacgaactctgtgcggtg
ttgccgaaggatagatgggtgcgcctgatgtacgcctacccccacggcatcagcgagcgc
ctgattgccacgatggcgcgccatccgcagatctgccattacctggatatgccgttgcag
catgcccatcccgaaacgctgcgccggatgcaccgcccgcccgacagtgatcgcaccaga
cgcctgattgccgacctgcgcgcggcgatgcccgatattgcgctgcgctcgacattcatc
atcggctttccaggggagaccagtgccgaatttcgggcgttgacggcgtttctcgaagaa
gtgcagttcgaccgggtaggggtctttcgctattcacgcgagccaggcacgccagcagca
gcgttgccggatcagataccacagcgagtcattgagcgccgctggcatacgatcatgcgc
ttacagcagggtatttcgcgccagcgcaaccgtcgctgggtcgggcgtgtcattcgggtg
ctggtggagggacagggacagaccgacgacgggcgcctgctgagcgtcggacgctctttc
cgcgatgctcccgaagtcgatggacaggtgttgttctggggaaccgccgccactggcaca
ttcgttgatgtgcgggtgacgcaggcactcgactatgacctgtggggtgagatggtcgaa
gcgcctgcggacgatgcgaggagtgaaaacgggacgtag
DBGET
integrated database retrieval system
