KEGG   Roseiflexus sp. RS-1: RoseRS_0651
Entry
RoseRS_0651       CDS       T00542                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
rrs  Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rrs02048]
    RoseRS_0651
Enzymes [BR:rrs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RoseRS_0651
Prokaryotic defense system [BR:rrs02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    RoseRS_0651
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Cas3_C ResIII Helicase_C nSTAND_NTPase5 Glyco_trans_4_5
Other DBs
NCBI-ProteinID: ABQ89071
LinkDB
Position
complement(804301..807084)
AA seq 927 aa
MKSIDPLLLQFWGKTPRPGTPVTQFHPAIFHMLDVACVAEALLRHGPQRVRQALLHAWRG
ADPEALISWLPFLIALHDLGKLSAAFQGQDEAQRERLTRAGVQFRSHSPELHHAAISALW
IHDYLAQNEPEIAQDLVWIFRDATGGHHGRFVDESMEDLRKKLHYVERGESRWRDWRKQG
YVLLRDLLAPEDKPLHRIGTPVAPRPATVALTGLLVWSDWIGSNEHDFPATPGMDIHCYL
SLSRQRAQNALTTHYLRASRSQPQYSDFRALFQAIAPRPLQAVVDRLSDNDLRQPALVVI
EAPTGEGKTEAALALARRIAALRGIDEIFFALPTMATGNQMFTRLERFFRTLYGDGGSVR
LSHSQAIVVEDDLRRRVTLSADQDRSDPEGCSADVMLGWFVGPKKAMLAPFGVGTVDQVE
LGGLNVRHYPLRLFGLASKVVMIDEVHAYDAYMSVILEHTLAWLATLGCSIILLSATLPR
QRHDALARAFLRATEPAAALSLPEKLPYPALSLYHATAQSHHTCDVFRGEQRFILRFRKQ
SAPEEEAGRLLELIRNGGAVARICNRVDDAQAIYRALIASGARDVTCVLLHARFPLHERQ
RREQCISNLVGKDSQRTPEQRIIIAGTQVLEQSLDYDVDVMVSDFAPIDLLLQRAGRLHR
HNRCRPDDHREPVLEIVIPYDEQGEPDWRRWRAIYEPYILWRSLATLCDGLTDDTRIVTL
PRDYRTLIEAVYSAAPVVGRYAGEVAKAEQEYRKTIDAQTAKARSPLTPDAMIRAPIVEH
GGRSYIEEETGAEASWQLAKTRLGDRVTLVPVYRVNGEVSLDPGGTFRIPTDVPPTLEQM
KDVINVAVPVSDRAVIAAYRDEHRDRALRWTWSVIPAPLRGLHPLPLDVQTHSITINRRR
LRLDNELGLVIEKGDADVSGDWFEEDL
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgaaaagcatcgatccgctgctcctgcaattctggggaaaaaccccccgtccaggtacg
ccggttacccaatttcatccggcgatctttcatatgctcgatgtcgcatgtgtcgccgag
gcgcttctgcgacacggaccgcaacgggtgcgtcaggcgcttctgcatgcctggcgcggc
gccgatccagaagcattgatctcctggcttccatttctaattgcgcttcacgatctgggc
aaactctctgctgcttttcaagggcaggacgaagcccagcgcgaacgtctgactcgagca
ggggtgcaatttcgatcccactccccggagttgcaccatgccgcgatcagcgcgctctgg
attcatgattatctcgctcagaatgaaccagagatcgcacaagacctggtctggattttc
cgtgatgcaacgggaggacaccacgggcgcttcgttgacgagtcgatggaagacctgcgc
aagaaattgcattacgtggaacgtggcgaatctcgctggcgagactggcggaaacagggc
tacgttctccttcgcgatctgctggcgcctgaagataaaccgctgcaccgcattggaaca
cccgtcgcaccacgccctgcgaccgttgcactgaccggactgctggtctggagcgactgg
atcggttcgaatgaacacgacttcccggctacacccggaatggacattcattgctacctg
tcgctcagtcgtcagcgcgcgcagaacgccctgacgacacattatctccgggcaagccga
tctcaaccgcagtactcggatttccgcgcacttttccaggctatcgcgccacgtccgtta
caggcagtcgtagaccgcctgtccgacaatgacttgcggcaaccggcgctggtcgttatc
gaagctcccaccggcgagggcaagacagaagcggctctggcgcttgcacggcgtatcgcc
gctctccgaggaatagatgagatcttctttgccctgccgacgatggccaccggtaatcag
atgtttacccgtcttgaacgattcttccgcaccctgtatggcgatggcggcagtgtgcgc
ctgagccacagtcaggcgattgttgtcgaagacgatctgcgtcgccgggtgacgctcagc
gctgatcaggatcgatccgatcctgaagggtgcagcgcagacgtgatgttagggtggttc
gtcggaccgaagaaggcgatgcttgcgccgtttggcgtcggtacggtggatcaggtcgaa
ctcggaggcttgaatgtgcgccattatccgctacgattgttcggtctggcgagcaaagtg
gtgatgatcgatgaggtgcatgcctatgatgcgtatatgagcgtcattctcgaacatacc
cttgcctggctggcgacgctgggttgttcgatcatcctcctgtccgccacactgccgcgt
cagcgtcacgatgcattagcgcgcgcatttcttcgcgctacagagcctgcagccgccctg
tctcttccagaaaaattgccgtatccggcgctttcactgtatcacgccacggcgcaatcc
caccacacctgtgatgtcttccgcggcgagcagcgctttatcctgcgattcaggaagcaa
agcgctcccgaagaggaagccggacgattgctggaactgatacgcaatggcggcgcagtt
gcgcgtatctgcaaccgggtggatgacgcgcaggccatctaccgggcgctgattgcctcc
ggtgcgcgtgatgtaacgtgcgtgctgctccacgctcgctttccgctccacgaacggcag
cgtcgggagcaatgcatcagcaatctcgtcggcaaagattcgcagcgcacgcctgagcag
cgaatcattatcgcaggaacccaggtgctggaacagagcctcgactacgacgttgatgtc
atggtcagcgactttgcgccgattgatctgctcctccaacgcgccggtcgtctccatcgc
cacaatcgatgccgtccagacgaccatcgtgagcctgtgctggaaatcgtgattccatac
gacgagcagggcgaaccagactggcgtcgctggcgagcgatctatgagccgtatatcctc
tggcgcagtctggcaacactgtgtgacggcttaactgacgatacacgcatcgtgacctta
ccccgcgattatcgaactctgatcgaggcagtctacagcgcggcgcctgttgtcggtcgc
tacgccggggaagttgcaaaagcggagcaggagtatcgtaagaccatcgatgcgcaaact
gctaaagcgcgcagcccgctcacgcctgatgcaatgatccgggcgccgattgtcgaacac
ggcggtcgctcctatatcgaagaagaaacgggtgcggaggcttcctggcaactggcaaag
acgcgcctgggcgaccgggtgacgcttgtgccggtctaccgggtcaatggtgaggtatcc
cttgatccaggcggaacctttcgcattccaaccgatgtgccgccgacgctggagcagatg
aaggacgtgatcaacgttgccgtaccggtcagtgatcgcgcagttatcgctgcctaccgc
gacgagcatcgggatcgcgcactacgctggacctggagtgtaattccggcgccgctccgc
gggctgcatccactcccattggatgtgcagacgcacagtatcaccatcaacaggcgtcgc
ctgcgtcttgataacgaactggggttggttatcgagaagggggatgccgacgtgagcggt
gattggtttgaggaggatctatga

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