Roseiflexus sp. RS-1: RoseRS_0864
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Entry
RoseRS_0864 CDS
T00542
Name
(GenBank) putative TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrs03016
]
RoseRS_0864
Transfer RNA biogenesis [BR:
rrs03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
RoseRS_0864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DeoC
DHO_dh
His_biosynth
PEP_mutase
IMPDH
SOR_SNZ
Oxidored_FMN
FMN_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
ABQ89277
UniProt:
A5URM4
LinkDB
All DBs
Position
complement(1078699..1079748)
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AA seq
349 aa
AA seq
DB search
MSTIPRKPDGSLQSMNDNLPTKYQIRHITIEPNIVLAPMVGVTDSIFRRMILSLGGCGLV
CSEMTSASAVSPRARSRHRQLDYLPEERPIAMQLSGNDPDLVAAAARVVEELGADILDIN
CGCPSPKVTGGGHGSALLRDLPTMERLLKAVCAAVQIPVTLKFRAGWDEASLNYLDTAKM
AEQAGVAALALHPRTRAQGYSGVADWTRVAEVKRAVSIPVIGSGDVRDAADALRRLHESG
ADGVMIGRGAMHNPWIFRQIAQLRTGMQPMTVTPADKYDFLTRYLEMCCDEMPERLALNK
LKQLIGQFGIELPGAAALRSAVHHSSSVAEARDHLERFFAWHIEAMAVG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgattccacgaaagccagatggttcattgcagtctatgaacgacaaccttcca
acgaagtaccagatcaggcatatcaccatcgagccgaacattgtgctggcgccgatggtt
ggcgtcaccgatagcatcttccgccgcatgatcctcagcctgggcggatgcggattggtg
tgcagcgaaatgaccagcgcctcggcggtcagtccgcgcgcgcgcagccgccatcgccag
ctcgactatctgcccgaagaacgcccgatcgctatgcaactgagcggcaatgatccagac
ctggttgcggcggctgcgcgcgtcgtcgaagaactcggcgccgatattctcgacatcaac
tgtggatgcccatcgccaaaagtgactgggggcgggcacggttcggcgctgctgcgcgac
ctgccgacaatggaacgactgttgaaggcagtctgcgctgcggtgcagatcccggtgacc
ctcaagtttcgcgccgggtgggacgaagcgagcctgaactacctggatacggcaaaaatg
gcggagcaggctggcgtggcggcgctggcgctccatccgcgcacgcgcgcccaggggtac
agcggtgtcgccgactggacgcgggtcgccgaagtcaagcgcgctgtcagcattcccgtc
atcggatcaggggatgttcgtgatgccgccgatgcgcttcgccgtctgcatgaaagcggc
gccgacggtgttatgatcgggcgcggcgcgatgcataatccgtggatcttccgacagatt
gctcaattgcgtacaggaatgcaaccgatgacggtcacacccgccgacaaatatgatttt
ctgacgcgctatctggagatgtgttgcgacgaaatgcccgaacgcctggcgctgaacaag
ttgaaacagttgattggacagtttggcattgaactgcccggcgcagccgcactgcgcagc
gcagtgcaccactcgtccagcgtcgccgaagcgcgcgaccatctcgagcgtttctttgcc
tggcatatcgaggcgatggcagtcggttga
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