Roseiflexus sp. RS-1: RoseRS_1007
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Entry
RoseRS_1007 CDS
T00542
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00061
Fatty acid biosynthesis
rrs00071
Fatty acid degradation
rrs01100
Metabolic pathways
rrs01212
Fatty acid metabolism
rrs02024
Quorum sensing
rrs04146
Peroxisome
Module
rrs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RoseRS_1007
00071 Fatty acid degradation
RoseRS_1007
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RoseRS_1007
09145 Cellular community - prokaryotes
02024 Quorum sensing
RoseRS_1007
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrs01004
]
RoseRS_1007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrs04147
]
RoseRS_1007
Enzymes [BR:
rrs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RoseRS_1007
Lipid biosynthesis proteins [BR:
rrs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RoseRS_1007
Exosome [BR:
rrs04147
]
Exosomal proteins
Exosomal proteins of breast milk
RoseRS_1007
Exosomal proteins of breast cancer cells
RoseRS_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABQ89416
UniProt:
A5US13
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All DBs
Position
complement(1232784..1234349)
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AA seq
521 aa
AA seq
DB search
MLNLAILLEESARRTPGKTAVILDSIRLNYAELNGAACKIANGLTKLGVRPGDKVAIMLP
NTPHFVMCYYGILKAGATVVPLNVLFKRHEVEYHLEDSDSVALIVWEGFLDEAAYGFRMA
ETCRHLIVAQAPGSTATLPDGAIPLGNILAENPHVFDTIQTMPDDTAVILYTSGTTGRPK
GAELTHANMFLNATICADKLLDISSDSVGLAVLPLFHSFGQTCVMNTLLYLGGTITLLPR
FEPQKALEVMARDRVTYFAGVPTMYFYLLNFPNADQYDLSALRFCVSGGAAMPVEVMHAF
NRKYNVTILEGYGLSETSPVASFNHLDREPKPGSIGIPIWGIEMRVVDSEGREVPNGELG
EIVIRGHNVMKGYYKRPDATADAIRNGWFYSGDIAYRDDDGFFFIKDRVKDMIIRGGFNV
YPREIEEVLYGHPAIAEAAVIGVPDPALGEEVKAVVAFKPGQTATEAEIIEYCKERLAAY
KYPRFVEIRDTLPKTATGKILKRELRQVDTGVSQMEATASA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatctcgccatcttgctggaggagagcgctcgccgcacgcctggaaagaccgcc
gtcatcctcgatagcatccgcctgaactatgccgaactgaacggcgccgcctgcaaaatc
gccaatggtctgacgaaactcggtgttcgtcctggcgacaaggttgcgatcatgctcccc
aacacgccgcacttcgtcatgtgctactacggcatcctgaaggcaggagcgaccgtcgtg
ccgctgaatgtgctgttcaagcgccacgaggtcgagtatcatctagaggatagcgattcg
gtagcgttgattgtctgggaaggttttctcgacgaagcggcgtatggttttcgcatggct
gaaacctgtcgtcatctgatcgtcgcacaggcgcccggttcaactgcaaccctcccggat
ggcgcgattccacttggcaacatccttgccgaaaatccgcacgtcttcgacaccatccag
acgatgccggacgacacggcggtcattctgtacaccagcggcaccaccggccgtccgaag
ggcgccgaactgacccacgccaacatgttcctcaatgcgacgatctgcgccgataagttg
ctcgatatctcatccgattcggtgggcctggcagtgttgccgttattccacagtttcggg
cagacgtgtgtgatgaacacgctgctctaccttggcggaacaatcacgttgctgccgcgc
ttcgagccgcagaaggcgctggaggtgatggcgcgcgaccgggtgacctattttgccggt
gtgccaacgatgtacttctacctgctcaatttcccgaatgcggatcagtacgatctgtca
gcgctcaggttctgcgtgtcgggtggcgcagcgatgccggtggaggtgatgcacgccttc
aaccgcaaatacaacgtcaccattctcgaagggtatggtctctccgaaacctcgccggtt
gcatcgttcaaccacctcgaccgggagccgaagcctggttcgatcggcattccgatctgg
ggcatcgagatgcgcgtggtggacagcgaagggcgtgaggttcccaacggcgagttgggg
gagatcgtcattcgcggtcataatgtgatgaaagggtactacaagcgccccgacgccacc
gccgacgcgatccgcaacggctggttctacagcggcgacattgcgtaccgcgacgatgac
gggttcttctttatcaaagaccgcgtgaaagatatgatcatccgcggcggcttcaatgtc
tatccgcgtgagatcgaagaggtgctctacgggcatcccgctattgccgaagcggcggtg
atcggcgtgcccgatccggcgctcggcgaagaggtgaaggcagtggtggcgttcaaaccg
gggcaaaccgccaccgaggctgagatcatcgaatactgcaaagaacgcctggcagcctac
aagtatccgcgcttcgtcgaaatccgcgatacgctgcccaagacggcaaccggaaagatc
ctcaaacgtgaacttcgccaggttgataccggtgtgagtcagatggaagcgaccgccagc
gcatag
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