Roseiflexus sp. RS-1: RoseRS_1216
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Entry
RoseRS_1216 CDS
T00542
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RoseRS_1216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrs02000
]
RoseRS_1216
Enzymes [BR:
rrs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RoseRS_1216
Transporters [BR:
rrs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RoseRS_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_21
AAA_22
AAA_29
AAA_30
Zeta_toxin
MMR_HSR1
SbcC_Walker_B
nSTAND1
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABQ89623
UniProt:
A5USM0
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All DBs
Position
1494462..1496255
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AA seq
597 aa
AA seq
DB search
MINRQSRNSRCAVDVIPVRTVDWRRLLHYLHPYRRHMLGALLALAGASAINLGFPLVIVQ
LLEAVLQQGDQTLLTNLTLALIVLFFVQAFLTFLQGYILNVVGERIVLDMRVQLYRHLHT
LSLSFFASQRVGEIVSRISSDVTQVRSILTNNVTQFLSSIVALFGAIIIVFLLNPRLVGF
VLALAISVVTVAAVFGRWLQRFSTRVQDELADATVAVEEGLQGVRVVKSYVRESYETGLY
ERAMQRTLKAALRLALLRSAFGGLMAFLGFSGIAAILWFSGSEVLAGRMSFATISGFLIY
AITIGASLAQLSGLYGQFREAVGAVRRVFEILDTQPTIKDAPDARVLPPVHGEIVFDDVS
FEYETGQGVLHNIALAIQPGEIVALVGPSGAGKSTLFNLIPRFYDPTSGRVLIDGYDLRD
VTQRSLREQIGLVPQETMLFGGTIRENIVYGKLDASGEEIIAAAKAANAHDFIMAMPRGY
ETLVGERGIKLSGGQRQRIAIARVMLKNPRILLLDEATSSLDSESEALVQEAFERLMRGR
TSVIIAHRLSTVSIAHRIVVLNHGRIVEQGTHEELLANQGLYARLYALQFREGVMVG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccggcaatctcgcaattcacgatgcgcggtggatgtcataccggtgcgcacg
gttgactggcgtcgcttgctgcactatctgcacccgtatcgtcgccacatgctgggtgcg
ctgctggcgcttgcgggggcaagcgcgatcaatctcggttttccactggtcatcgtgcag
ttgctggaggctgttttgcagcagggcgaccagacgttgctgacgaatctgacgctggcg
ttgatcgtcctcttttttgtgcaggcgttcctgacgtttctccaggggtatatcttgaac
gtcgtcggtgagcggatcgtgcttgatatgcgggttcagttgtaccgccacctgcacacg
ctctcgttgagtttctttgccagccagcgcgtcggcgaaatcgtgtcgcgcatctccagc
gatgttacacaggtgcggtcgatcctgacgaataatgtcacccaattcctttcgagcatc
gtcgcgctgttcggtgcgatcatcatcgtctttctgctcaatccgcgcctggtggggttt
gtgctggcgctggcgatcagcgtcgtcaccgtggcggcggtctttggtcgctggctgcaa
cgcttcagcacccgggtgcaggatgaactggcagatgcgacggtggcggtcgaagagggg
ttgcaaggggtgcgggtggtcaaaagttacgtccgtgagtcgtatgaaaccgggctttat
gagcgcgcgatgcagcgcaccctgaaagcggcgctgcgtctggcgctgctgcgatcggca
tttggcggactgatggcgttcctggggttcagcggcatcgcggcgatcctgtggttcagc
ggcagcgaggtgctggcggggcgcatgtcatttgcgacgatcagcggttttctgatctat
gcgattaccattggcgccagcctggcgcaactctccgggttgtacggtcagttccgcgaa
gcagtgggcgcagtgcggcgcgtgttcgagattctcgatacgcaaccgacaatcaaagat
gcgccggacgcgcgcgttctgccgccggtgcacggcgagatcgtgttcgatgatgtttcg
tttgagtacgaaaccggtcagggagtgttgcacaacattgcgcttgctatccaaccgggc
gagatcgtggcgctggttggtccgagcggggcaggtaaaagtacgctgttcaatctcata
ccgcgcttttacgacccgacatccgggcgggtgctgatcgacgggtatgatctgcgtgat
gtgacgcagcgcagtctgcgggagcagatcggtctggttccgcaggaaacgatgctgttc
ggcgggacgatccgcgagaatatcgtctatgggaaactggatgcgagcggagaggagatc
atcgcggcggcaaaggctgcgaatgcgcacgatttcatcatggcgatgccgcgcggatac
gagacgctggtgggggaacgcggcatcaagttgagcggcgggcagcgtcagcggatcgct
attgctcgtgtgatgctgaagaacccgcgcattctgctgctcgacgaagcaaccagttca
ctcgatagcgagtcggaggcgctggtgcaggaagcgttcgagcgcctgatgcgcgggcgc
acgtcggtcattatcgcgcaccgtctcagcaccgtctcgattgcccaccggatcgttgtg
ctcaaccacgggcgcattgtcgagcaggggacgcacgaggagttactggcgaaccaggga
ttgtatgcgcgcctctatgccttgcagttccgcgagggagtgatggtggggtga
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