Roseiflexus sp. RS-1: RoseRS_1430
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Entry
RoseRS_1430 CDS
T00542
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrs03032
]
RoseRS_1430
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_1430
Enzymes [BR:
rrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RoseRS_1430
DNA replication proteins [BR:
rrs03032
]
Prokaryotic type
DNA Topoisomerases
RoseRS_1430
DNA repair and recombination proteins [BR:
rrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RoseRS_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
SPDY
Motif
Other DBs
NCBI-ProteinID:
ABQ89828
UniProt:
A5UT75
LinkDB
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Position
complement(1741028..1743397)
Genome browser
AA seq
789 aa
AA seq
DB search
MGEKLVIVESPAKARTIQKYLGQGYRVEASMGHVRDLPKSDLGVDLDANFTPVYEVSPGK
EKIIAALRKSIRQADAVYLATDPDREGEAIAWHITEAAKIPRGKPVYRVVFTEITPGAVR
SAMASPRDIDRRLVDAQQARRVLDRLVGYKLSPLLWEKVRRGLSAGRVQSVAVRLIVERE
REIEAFVPQEYWTIEADLLKQEARDPFRAVLIERAGRKLEKFDIGSGEQAQAIIVDLEGA
AYIVRKVTRRDKRRSPPPPFTTSTLQQEAGRKLGFSAKRTMAVAQQLYEGVDIGGDEGLV
GLITYMRTDSVNVSREAQEEARIVIRDRYGEAYLPPKPPVYKTKTKGAQEAHEAIRPTLS
RRTPEQVQPYLTSDQYRLYELIWKRFVASQMEAAVFDSTTVDIGAGRGIERSAGNDPYTF
RTTGSVLKFPGFLAVYNVSLDEGEEDEDSERRLPLLAEGDVLALVQLLPVQHFTEPPPRF
TEASLVKELERLGIGRPSTYAPTISTIIEREYVELADKKLVPTTLGRVVTDLLVQHFPSI
VDYGFTSEMEQQLDDIAEGEKEWTPVLRSFYEPFEQKLADAQRSMRNVKREEILTDLTCP
KCSQGQLAIRFGKNGEFLACNRYPECDFTSDFHRDGEGRIVIDAPAAPEVSDVICELCGR
PMVLKKSRFGPFLGCSGYPECKNTRRLDKQGKPVPPPKATGVTCPKCRQGELLERRGKFG
RPFFGCSRYPKCDYLVNSLEEVANYTPENNAPMEAKAEEQPATKRTKTSTGKKRAKTTAP
GSGTPNVED
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagaaactggttattgtcgagtcgccagccaaggcgcgcaccatccagaagtac
ctcggtcaggggtatcgggtcgaggcgtcgatggggcatgttcgcgatctgccgaagagc
gaccttggcgttgatctcgatgcgaactttacgccggtgtatgaggtttcgccgggcaag
gagaaaatcattgccgcgctgcgcaaatcgattcgccaggcggatgccgtgtatctggcg
accgacccggaccgcgagggggaagcaattgcctggcatatcaccgaggcggcgaaaatt
ccgcgcggaaagccagtgtaccgggttgtcttcaccgaaattacgcctggtgcagtgcgc
agcgccatggcgtcgccgcgcgacattgatcggcggttggtcgatgcgcagcaggcgcgt
cgtgtgctggatcgtctggtgggctacaaactgtcgccgctcctgtgggagaaagtgcga
cgcgggttgtccgccgggagggtgcaatcggttgcagtacgcctgatcgttgagcgtgaa
cgcgagatcgaggcattcgttccgcaggaatactggacaatcgaagccgatctgctcaaa
caggaagcgcgcgatccgtttcgcgccgtgctgatcgagcgtgctggcaggaaactcgaa
aagttcgacatcggctcaggtgagcaggcgcaggcgatcattgtcgatctggaaggcgcc
gcgtatatcgtgcgcaaggtgacgcgccgtgacaaacgacgcagcccgccgccgccgttc
actaccagcacccttcagcaagaagccgggcgcaaactcggcttttccgcaaaacgcact
atggcagtggcacaacagttgtacgaaggggtggacattggcggcgatgagggtttggtt
ggtcttatcacgtatatgcgcaccgatagcgtgaatgtatcgcgcgaagcgcaggaagaa
gcacgcatcgttattcgcgatcggtacggcgaagcatacctgccgcccaaaccgccggtt
tacaaaacgaagaccaaaggagcgcaagaggcgcacgaagccatccgtccaaccctcagc
cggcgcacgccggaacaggtgcaaccctacctgacgagcgatcagtaccgtctctatgag
ttgatctggaaacggtttgtcgccagccagatggaggcggcggtgttcgacagtacgacg
gtggacattggcgcagggcgcgggatcgagcgcagtgcgggcaacgatccgtacaccttc
cgaaccaccggttccgtcctgaagttccccggattcctggcggtctacaacgtcagcctg
gacgaaggcgaggaggatgaggatagcgaacggcgattgccgctgctggcggagggtgat
gtgctcgcgctggtgcaactgttgccggtgcagcacttcaccgaaccgccgccacgcttc
accgaagccagcctggtgaaggagttggaacgtctcggcatcggacgtccttccacgtat
gcacccaccatctcgacgatcatcgagcgtgagtacgttgaacttgcggataagaaactc
gtgccgactacccttggcagagttgtgaccgacctgttggtgcagcatttcccgagcatc
gtcgattatggcttcacctcggaaatggagcagcaactcgatgacatcgctgaaggggag
aaagagtggacgccagtattgcgctccttctacgaaccgtttgagcagaaactggcggac
gcgcagcgcagtatgcgcaatgtcaagcgcgaggagatcctgaccgacctgacctgccca
aagtgcagtcagggacagctggcgatccggttcggcaagaatggcgaattcctggcatgc
aaccgctacccggagtgcgatttcaccagtgactttcatcgcgacggcgagggacgcatt
gtgatcgatgcgccagccgcgccagaagtgagtgacgtcatctgtgagttgtgcggacga
ccaatggtgctgaagaagagccggttcggtccattcctgggatgcagcggctacccggag
tgcaaaaatacccgacgcctcgacaaacaggggaagccggtgccgccgccaaaggcgacc
ggcgtgacctgcccgaagtgtcgtcagggggaattgctggagcggcgcggcaagtttggt
cgtccgttcttcggatgcagtcgttatccgaagtgcgactacctggtgaactcgctcgag
gaagttgcaaactacacgcccgagaataacgcgccaatggaggcgaaggcagaggaacaa
cctgcaacgaagcgaacaaagacatccaccggcaaaaagcgggcaaaaacaactgcacct
gggagcggaacaccgaacgtggaagattga
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