Roseiflexus sp. RS-1: RoseRS_1702
Help
Entry
RoseRS_1702 CDS
T00542
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RoseRS_1702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
PKD_4
Big_7
Motif
Other DBs
NCBI-ProteinID:
ABQ90092
UniProt:
A5UTY9
LinkDB
All DBs
Position
2093415..2097953
Genome browser
AA seq
1512 aa
AA seq
DB search
MPARFRFLRYVLIVVLLVVSIPLLSAPGHSSFIERMTTPPAAIAQSAAPVGPQPGDVFRQ
FQDDLNSRQTSVCNSSPANCGTIPSEQQRQARNVDLANAVRAEAVFEYWGGHLASTQQEF
NVNGGPWTPYPDIQGIPPDTLPTCYFRAPTNAIAPLPLSGTGGVRPPGSTGSTVTVNYRY
RIGPQRSLPQCASGTNFYWGNMWIYEVTTRIYYNSTIPRPDGAITSPTDGATITENRSAN
QFPRITVRAQASTGRSIARVDLIGNYLDYDWDGDGILREWHYALRHGVWERTIGTSTSPS
RGTATSGEYDFTWNTEWIPDQDQPVQLMARITDNTGVSYMTEAVTVTFNRVGRSVRMYTT
WSDYYGQRVFGPPRNFGFNTYSQPRIGKTAFISIPDPLTNATRARVILYSWSGRSSTALS
TTVAINAFSVWSGNSFGIFHDYNFDTRDLNNPRDFLNQGDNILRIWSNRTDHALEVLWPG
PAIFVEYSAPPETPVLRAIDTSFSTPEDQSLSFTLPVSNQARAALQYTILTPPALGTLRG
IAPNLTYIPNPDVNGSDSFVFRVDDQYGRSATATVAINIQAVDDPPEITLGGGALLNPDD
VLDRSGRVRDPDSSSLTATVDYGDGRGEQPLSLGADGSFRLIYRYRNGGRFPLTVRVSDG
AQTSVATVLVTVITPGTPPPPGDWSLTGWRYRVPLEARSGAYPRVDHVAEFDVNFTTALS
QAGGSGALLRESIRVVEVDAGGNVIDPNVVYQFDPVSAYNPTTNARGTLLVLLRGRTEAN
TTRRFYVYFETQGRFAPPTFTPLTVVVTPTLIYQRDLATVIETRTSDGQRNATFYYSLNG
GALISMFDRSNADWISYNPAADSAGAYRGIPNVGPVFHPGYYNVFPIPSASGPLQGNEPG
TNQRSSTTIEREGTLRTIVRSVSSNGQWEAVWEFFPNSVRMLVLPREPRGSNPFLYWWLY
EGTPGGTLNEGDRWVRGDGLSGIAVDPSFSFNERFHADINGPEWVYFRAGEPSQGGRALW
LAHHDDTDTTIEMYRYQNDSSGWQNGMTVFGFGRREWDGSSQTLRPELRNQRRFSLGFID
NAPLTFDSAVGREIEGRYRDLAATVGRGERLAPNLAPWAPGETYSVRPGQTLNVPAPGVR
ANDSDGDGDPFQVTLTGEPQNGTLTFNSDGSFIYVPNEGFVGADVFTYTASDGRLSAPPT
TVTILVSPNQPPTARGSSATTTNLRPLTVPAPGVLEGASDPDGDPLTAVLISPPAGGTLN
LNPDGSYTYTPRSDFIGEDVFQIAASDGEAQSAPVEVRITVRKENRPPTARGSSATTTNL
RPLTVPAPGVLEGASDPDGDPLTAVLISPPAGGTLSLNPDGSYTYTPRSDFIGEDVFQIA
ASDGEAQSAPVEVRITVRKENRPPTARGSSATTTNLRPLTVPAPGVLEGASDPDGDPLTA
VLISSPAGGTLSLNPDGSYTYTPRSDFIGEDVFQIAASDGEAQSAPVEVRITVTREVAST
PEYRVFLPLLVR
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccgtttccggttccttcgctatgtgctgattgttgtgcttcttgttgtttcc
attccgcttctatcggcgccggggcattcgtccttcatagaacgaatgacaactcctccg
gccgccatcgcacagagtgctgcgccagtcggtccgcagccgggtgatgtgttccggcag
tttcaggacgacctgaactcccggcagacctctgtctgcaattcatcacctgcgaattgc
ggtacgataccgtcggaacagcaacggcaggcgcgaaacgtcgatcttgccaacgcggtg
cgcgccgaagcagtgttcgagtattggggcgggcacctcgcttcgacgcagcaggaattc
aatgtgaacggcggtccgtggacgccctacccggatattcagggcatccctcctgatacg
ctcccgacctgttatttccgcgcgccaaccaacgcgattgcgccgttgcccctgagtgga
accggtggtgttcgtccaccgggcagcaccggcagtaccgtgacggtcaactaccgctac
cggatcggtccgcagcggtcattgccgcagtgcgcctcaggcacgaacttctactggggc
aacatgtggatctatgaggtgacaacgcgcatctactacaactcgaccatcccgcgccct
gatggcgcaatcacttcgcctacggatggcgccacaatcaccgagaaccgcagcgccaac
cagtttccgcgcatcacggtgcgggcgcaggcatcgaccggtcgctcgattgcgcgcgtc
gacctgatcgggaattatctcgattatgactgggatggcgatggcatattgcgcgaatgg
cactacgcgctgcgccacggcgtctgggaacgcaccatcgggacgagcacgtcgccgtcg
cgcggtacggcaaccagtggagagtacgattttacctggaatacggaatggattccggat
caggatcaaccagtgcagttgatggcgcggatcaccgataacaccggggtcagttacatg
accgaggcggtgacggtcacgttcaaccgcgtcgggcgcagtgtgcggatgtacaccacc
tggagcgactactatgggcagcgggtgttcggtccgccgcgcaactttggctttaatacc
tacagtcagccgcggattggaaagacagcgttcatttccatcccggatccgctcacgaat
gcaaccagagcgcgggttattctctacagttggagcggtcgttcgtcgactgcgttgagc
accacggttgctatcaatgccttctcagtctggtctggaaattccttcggtatattccac
gattacaatttcgatacgcgcgaccttaataatccccgcgattttctcaatcagggcgac
aatatcctgcgcatctggtcgaatcgtaccgatcacgcacttgaagtgctctggcccggt
ccggcgatcttcgttgagtatagcgctccgcccgaaaccccggtgttgcgcgctatcgat
acctccttcagcacaccggaggatcaatcgctgtcgttcacgctgccggtgagcaatcag
gcgcgcgccgcgctccagtatacgattctgactccgcctgcgctcggaacactgcgtggc
atcgctcccaatctgacctacatccccaacccggatgtcaacggcagcgatagttttgtg
ttccgcgtcgatgatcagtatggacgtagcgctacggcgaccgtcgccatcaatattcag
gcggttgatgacccgccggagataacgctgggcggcggggcgttgctgaatcccgacgat
gtgctggatcgttccggcagggtgcgcgatccggattcttcatcgctgacggcgacggtc
gattatggcgatggccgcggtgagcaaccgctgagtcttggggcagacggctcgttccgg
ctgatctaccgataccgcaacggcgggcgctttccgctgacggtgcgggtcagcgatggc
gcgcagaccagcgttgcaaccgtgctggtgaccgtgatcacccccggcacgcctccgccc
cccggtgactggagcctgacaggatggcgctatcgtgtgccgctggaggcgcgctcaggc
gcatatccgcgtgtcgatcacgttgccgagtttgatgttaactttaccactgcgctgtca
caggcaggtggaagcggcgcgttgctgcgcgaatcgatccgtgtggtcgaggttgacgca
ggcggtaatgtgattgatccgaatgtcgtctatcagttcgatccggtgagcgcctacaat
ccgacgaccaatgcgcgcggaacgctgctggtgctgttacgcggacgcaccgaggcaaac
acaacccgtcgtttctatgtctacttcgagacgcaggggcgctttgcgccgccgacattc
acgccgctgacggtggtcgtcacgccgacgctgatctatcagcgtgacctggcaactgtt
atcgagacgcgcacgtctgatggtcagcgcaacgctacgttctattactcgctcaacggt
ggcgcgcttatcagcatgtttgatcgctcgaatgcggactggatttcgtacaatccggca
gccgactcggcaggcgcgtaccgcggtattccgaacgtcggtccggtcttccatcccgga
tactacaatgtgttccccattccgagcgcgtcaggtccgcttcaggggaacgaacccggt
acgaaccagcgatcatcgacgaccatcgaacgggaaggaacgctgcgcactatcgtgcgc
tcggtgagcagcaatgggcagtgggaggcagtgtgggagttcttccccaacagtgtgcgg
atgttggtgctgcccagagagccgcgcggttcaaatccgttcctctactggtggctgtac
gaagggacgccaggcggaacgctcaatgagggcgaccgctgggtgcgcggcgatggattg
tctggtatcgccgtcgatcccagtttctccttcaacgaacgcttccatgccgacatcaac
ggtccggagtgggtctacttccgtgccggtgaaccgtctcagggcggacgggcgctgtgg
ctggcgcaccatgatgataccgacacgacgattgagatgtatcgctatcagaatgactcc
tccggctggcagaatggcatgactgtcttcggtttcggtcggcgcgaatgggacgggtcg
tcgcagacgttgcgcccggaactgcgaaatcaacgccgtttctcgcttgggttcatcgat
aatgcgccattgacattcgatagcgctgtggggcgcgagatcgaggggcgttaccgtgat
ctggcagcgaccgtcgggcggggtgagcgcctggcgccgaaccttgcgccgtgggcgccg
ggagagacctacagcgttcgccctggtcagacgctgaatgtgccagcgcccggcgtgcgc
gccaatgacagcgacggcgatggcgatccgttccaggtgacactgaccggtgagccgcag
aacggcacactcacgttcaacagcgacggttccttcatctatgttccaaatgaaggcttc
gtcggcgccgacgtcttcacctatacggcgagcgatgggcggctcagcgccccgccaacg
acggtgaccatcctggtttcccccaatcagccgccgacggcgcgggggagcagcgcaacg
acgaccaacctgcgcccgttgactgtgccggcgccgggggtgctggaaggggcaagcgac
ccggatggcgatccgctgacggcggtgctgatcagtccgcccgctggcggaacgctgaac
ctcaacccggacgggtcgtacacctacacgccgcgttcggatttcatcggcgaggatgtg
ttccagatcgccgcctctgacggtgaggcgcagtcggcgccggtcgaggtgcggatcacg
gtgcgcaaggaaaatcgtccgccgacggcgcgggggagcagcgcaacgacgactaacctg
cgcccgttgactgtgccagcgccgggggtgctggagggggcgagcgaccctgacggcgat
ccgctgacggcggtgctgatcagtccgcccgctggcggaacgctgagcctcaacccggac
gggtcgtacacctacacgccgcgttcggatttcatcggcgaggatgtgttccagatcgcc
gcctctgacggtgaggcgcagtcggcgccggtcgaggtgcggatcacggtgcgcaaggaa
aatcgtccgccgacggcgcgggggagcagcgcaacgacgactaacctgcgcccgttgact
gtgccggcgccgggggtgctggagggggcgagcgaccctgacggcgatccgctgacggcg
gtgctgatcagttcgcccgctggcggaacgctgagcctcaacccggacgggtcgtacacc
tacacgccgcgttcggatttcatcggcgaggatgtgttccagatcgctgcctctgacggc
gaggcgcagtcggcgccggtcgaggtgcggatcacggtgacgcgcgaggttgcttcgacg
ccagagtatcgggtattcctgccgctgcttgtgcgctga
DBGET
integrated database retrieval system