Roseiflexus sp. RS-1: RoseRS_2006
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Entry
RoseRS_2006 CDS
T00542
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs03030
DNA replication
rrs03430
Mismatch repair
rrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RoseRS_2006
03430 Mismatch repair
RoseRS_2006
03440 Homologous recombination
RoseRS_2006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrs03032
]
RoseRS_2006
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_2006
Enzymes [BR:
rrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RoseRS_2006
DNA replication proteins [BR:
rrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RoseRS_2006
DNA repair and recombination proteins [BR:
rrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RoseRS_2006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DUF6186
Motif
Other DBs
NCBI-ProteinID:
ABQ90392
LinkDB
All DBs
Position
complement(2487092..2487793)
Genome browser
AA seq
233 aa
AA seq
DB search
MGAMFLFRRRPINLPEAVRAYLDAPRPDPDLPWRDVPYSVIDVETTGLNPRRDALLAIGL
VDIDDGRIRMDQRWYTLVRPPDDAPVNPEAIRVHGLLPQDVEQAPPPGDVLPVLLRRLTG
RVLVVHVADIDIGFLRQALRRLYQVDPRGPAIDTARLAWHFQRNQRLIDGADQEPALQLR
ALAESAGLPVYAEHNALNDALTTAQVFLAQINAMQPNGTPRLRDLLRAGGCLR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctatgttcctgtttcgtcgccgaccgatcaatcttccggaagccgtccgcgcc
tatctcgatgcgccgcgtcccgatcccgaccttccctggcgcgacgtgccgtacagcgtg
atcgatgtcgagaccaccggactgaacccgcgccgtgatgcactgctggccatcgggctg
gtggatattgacgacgggcgcatccgcatggatcagcgctggtacacgctggtgcgtccg
ccagacgatgcaccggtcaacccggaagccatccgcgtccacggattgttgccccaggat
gtggaacaggcgccgcctcccggcgacgttcttcccgtgttgctccgccgcctgacgggg
cgggtgctggtggtgcatgtcgccgatattgacatcggcttcctgcgtcaggcgctccga
cggttgtaccaggtcgatccgcgtggtcccgctatcgacacggcgcgcctggcatggcac
ttccagcgcaaccagcggctcatcgacggcgccgaccaggaacctgcgctgcaactgcgc
gcgctcgccgaaagcgcaggactgccggtgtacgccgaacacaacgcgctcaacgacgca
ctgacgacggcgcaggtcttcctggctcagatcaacgccatgcaaccgaacggcacgccg
cgcctgcgcgatctgctgcgcgcggggggatgcctgcggtaa
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