Roseiflexus sp. RS-1: RoseRS_2084
Help
Entry
RoseRS_2084 CDS
T00542
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00061
Fatty acid biosynthesis
rrs00071
Fatty acid degradation
rrs01100
Metabolic pathways
rrs01212
Fatty acid metabolism
rrs02024
Quorum sensing
rrs04146
Peroxisome
Module
rrs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RoseRS_2084
00071 Fatty acid degradation
RoseRS_2084
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RoseRS_2084
09145 Cellular community - prokaryotes
02024 Quorum sensing
RoseRS_2084
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrs01004
]
RoseRS_2084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrs04147
]
RoseRS_2084
Enzymes [BR:
rrs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RoseRS_2084
Lipid biosynthesis proteins [BR:
rrs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RoseRS_2084
Exosome [BR:
rrs04147
]
Exosomal proteins
Exosomal proteins of breast milk
RoseRS_2084
Exosomal proteins of breast cancer cells
RoseRS_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABQ90466
UniProt:
A5UV13
LinkDB
All DBs
Position
complement(2575292..2577067)
Genome browser
AA seq
591 aa
AA seq
DB search
MMNNNMDRPWFASYEPNVPRSVEIPNVTLNHFLAESTRKYPYNTATNFVLSYLARGLYTV
GGKMTYQKLSEMVDRFANALYQLGVRKGDRVALMLPNSPHYVIAFFAAMRIGAIIVNNNP
TYTARELKHQLVDSGSETIVLLNLFYPRLQEIRSETPVKRVIVAHIYDTLGPLSRFLVHA
KQSKQPDWVDVSRDSSVYLFQHLLERYGPNPPAVEVLPEDIALLQYTGGTTGLPKAAMLT
HRNLVANTVQVASWLTKTDYGAEKMMCAIPFFHVYGMTVAMIYGLYLGGELTIVPNPREL
DHVMDVMQRERSTLFPGVPAMYIRIVNHPRINEYDLKSIKACISGSAPLPIEIQEKFGQI
TGGRLVEGFGMTELSPVSHCNPVFGKRKKGSIGIPLPDVDAKIIDLETGEDIPFGSDKEG
ELVVKGPMVMKGYWNRPEETEATFTPDGWLRTGDICKVDEEGYFYIVDRKKDMMIASGYK
VLPRDVEEVLFTHPKVLEAVVVGIPNPARGDDTIKAFIVLKPGETATADEIREYCKQQLA
PYKVPREVEFRAELPKTMVGKVLRRVLIEEEKAKQSGAPAMETAGTPSAGA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacaacatggatcgaccctggttcgcgagttatgagccgaatgtgccgcgt
tctgtcgaaatccccaacgtcaccctgaaccactttctggcagagagtacgaggaagtat
ccgtataacaccgccacgaattttgtgctgagctacctggcgcgcggtctgtacaccgtt
ggcgggaagatgacgtaccagaagctcagcgagatggtcgaccgctttgccaatgctctc
tatcaactgggggttcggaaaggcgaccgcgtcgcgctgatgttgcccaactcgccgcac
tacgttattgcgttcttcgcggcaatgcgcatcggcgccattatcgtcaacaacaatcca
acgtacaccgcccgtgaactgaagcatcaactcgtcgatagcggttcagaaacgatcgtg
ctgctgaacctgttctacccccgcctgcaggagatccgcagcgaaacgccggtcaagcgc
gtcattgtcgcccatatctacgatacgctcggtccgctgtcacgcttcctggtgcacgcc
aaacagagtaagcagccggattgggtcgatgtctcgcgcgactccagcgtgtatctgttc
cagcatctgctcgaacgctacggaccgaatccgcccgccgtcgaggtgctcccggaagat
attgccctgcttcagtacaccggcggcaccactggtctgcccaaagcggcaatgctcacc
caccgcaatctggtggcaaatacggtacaggtggcttcgtggctgacgaagacggattac
ggcgccgagaagatgatgtgtgccattccgttcttccacgtatatggcatgacagtggcg
atgatctacggtctgtacctgggtggtgagttgacgattgtgcccaacccgcgtgaactc
gaccacgtgatggacgtgatgcagcgcgagcgctcaacgctctttcccggcgtcccggcg
atgtacatccgcatcgtcaatcatccgcgcatcaatgagtacgacctgaagtcgatcaaa
gcctgtatcagcggttccgcgccgctgccgattgaaattcaggagaagttcggtcagatc
accggcggacgcctggtggagggcttcggtatgactgaactttcgccggtttcacactgc
aacccggtgttcggcaagcgcaagaaggggtcgatcggcatcccgctgccggatgttgat
gccaagatcatcgatctggaaacaggtgaggatattccgttcggatccgacaaagagggc
gaactggtcgtcaagggtccgatggtgatgaaggggtactggaatcgccctgaagaaacg
gaagccacgtttacgcccgatggctggctgcgcaccggcgatatttgcaaggtcgatgag
gaagggtacttctatatcgtggatcgcaagaaggatatgatgatcgcgtcgggatacaaa
gtcctgccgcgcgatgtcgaggaagtgctcttcacgcatcccaaagtgctcgaagcagtg
gttgtcggtattcccaatccagctcgcggcgacgatacgatcaaggcgttcattgtgttg
aagccaggtgagacggcgactgccgacgagatccgcgagtactgcaagcagcaactcgca
ccgtacaaggtgccgcgtgaggtggagttccgcgccgaactgcccaagacgatggtcggc
aaggtgctgcgccgcgtgctgatcgaggaagaaaaagccaaacagtccggcgcgccagcc
atggaaacggcaggtacgccatccgccggtgcttga
DBGET
integrated database retrieval system
