Roseiflexus sp. RS-1: RoseRS_2399
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Entry
RoseRS_2399 CDS
T00542
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00020
Citrate cycle (TCA cycle)
rrs00190
Oxidative phosphorylation
rrs00650
Butanoate metabolism
rrs00720
Other carbon fixation pathways
rrs01100
Metabolic pathways
rrs01110
Biosynthesis of secondary metabolites
rrs01120
Microbial metabolism in diverse environments
rrs01200
Carbon metabolism
Module
rrs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rrs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rrs_M00376
3-Hydroxypropionate bi-cycle
rrs_M00613
Anoxygenic photosynthesis in green nonsulfur bacteria
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RoseRS_2399
00650 Butanoate metabolism
RoseRS_2399
09102 Energy metabolism
00190 Oxidative phosphorylation
RoseRS_2399
00720 Other carbon fixation pathways
RoseRS_2399
Enzymes [BR:
rrs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RoseRS_2399
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
NAD_binding_8
GIDA
FAD_binding_3
3HCDH_N
Pyr_redox
AlaDh_PNT_C
PALP
Motif
Other DBs
NCBI-ProteinID:
ABQ90776
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Position
complement(2968686..2970656)
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AA seq
656 aa
AA seq
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MTTTDTRPTTVRPATEYLDPKLNSKIPEGPIERKWERHKFEMKLVSPTNRRRYTIIVVGS
GLAGASAAATLAEAGYNVKCYTYHDSPRRAHSIAAQGGINAAKNYRNDGDSVFRLFYDTV
KGGDFRAREANVYRLAEVSMAIIDQCVAQGVPFAREYSGYLDNRSFGGAQVARTFYARGQ
TGQQLLLGAYQALSRQIGLGQVKMFSRTEMLDLVVIDGRARGIVTRDMVTGKIESHVADA
VVLATGGYSNVFYLSTNAKACNATAIWRAHRRGAFFGNPCFTQIHPTCIPVSGDHQSKLT
LMSESLRNDGRVWVPKTPGDKRPPSSIPEDERDYYLERKYPSYGNLVPRDISSRAAKQVC
DEGRGVGPGGLGVYLDFSDAIKRLGRKVIEERYGNLFEMYERITGENPYETPMRIYPAVH
YTMGGLWVDYNLMSTIPGLFVIGEANFSDHGANRLGASALMQGLADGYFILPYTIADYLA
STKFTKVDTTHIAFRETEAEVTERTNRLLNTKGTRTVDMFHRELGKIMWDYCGMARNEAG
LKHALEVIPELRERFWREVKVPGEGNDINQELEKAGRVADFMELAELMCIDALHRDESCG
GHFREEHQTEDGEAERDDENFAYVAAWEFTGLGTKPVLHREPLHFEYVKPAVRSYK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaccgataccagaccgacaacggtccggcctgcaacggaatatctcgatcca
aaactcaactcaaaaatacccgaaggtcccattgagcgcaaatgggagcggcataaattc
gagatgaaacttgtcagcccgaccaatcggcgacgctataccattattgtcgtcgggtct
ggtctggcgggcgcctcggcggcggcgacgctggcagaagccgggtacaatgtgaagtgc
tacacgtaccacgatagcccgcgtcgcgcgcacagcatcgctgcgcagggcggcatcaac
gccgccaagaactaccgcaacgacggcgatagcgttttccgcctgttctacgataccgtc
aaaggcggcgactttcgcgcgcgtgaggcgaatgtctatcgcctggcggaagtgagcatg
gcgattatcgaccagtgcgtcgcgcagggtgtgccgttcgcccgcgagtactccgggtat
ctcgataatcgttccttcggcggcgcacaggtagcgcgcaccttctacgcccgcgggcag
acggggcagcaactgctgctcggcgcataccaggcgctcagtcgccagatcggtctgggg
caggtcaagatgttctcgcgcaccgaaatgctcgacctggtggttatcgatgggcgggcg
cgcggcattgtgacccgcgatatggtgacgggtaagatcgagtcgcacgtcgccgacgcg
gtggtgctggcaaccggcgggtactcgaatgtcttttacctttcgaccaacgccaaagca
tgcaatgccacggcaatctggcgcgcccatcggcgcggcgcttttttcggcaatccctgc
ttcacccagatccatccgacctgtatcccggtcagcggcgaccatcagagcaaattgacc
ctcatgtcggagtcgctgcgcaacgatgggcgggtgtgggtgccgaagacgccaggtgat
aagcgtccgccgagttcaatcccagaagacgagcgcgactactacctggagcgcaagtat
cccagttatggcaacctggtgccacgcgatatttcatcacgcgctgcgaagcaggtctgc
gacgagggacgcggcgtcggtcccggcgggcttggcgtctatcttgacttctccgatgcg
atcaagcgtctcggcagaaaggtgatcgaagaacgctacggcaacctgttcgaaatgtac
gaacggatcacgggcgagaacccgtatgagactcctatgcgcatctacccggcggtgcac
tacaccatgggcgggttgtgggtcgattacaacctgatgagcaccattcccggtctgttc
gtcatcggcgaggcgaatttctccgatcacggcgccaaccgattgggcgcttcggcgctg
atgcaggggctggcagatgggtattttattctgccgtatacgatcgccgattatctggct
tccacaaaatttacgaaggttgacacaacgcacatcgctttccgtgaaacagaagcggaa
gtcaccgagcgcaccaaccgcctgctcaacaccaaaggcacgcgcacggtcgatatgttc
caccgcgaactcggcaagatcatgtgggactactgcggcatggcgcgcaatgaagcggga
ctgaagcatgcgctggaagtcattccagaactgcgcgaacgcttctggcgcgaggtgaag
gtgcccggcgaggggaacgatatcaaccaggaactggaaaaagccgggcgtgtggccgac
tttatggaacttgctgaactgatgtgcatcgatgcgctccatcgcgatgagtcgtgcggc
ggtcacttccgtgaagagcatcagacggaggatggcgaagcggagcgcgatgacgagaac
tttgcgtatgtggcagcctgggaattcaccggtctgggcacgaaaccggtgctgcacagg
gaaccgttgcacttcgaatatgtcaagccggctgttcgcagttacaagtaa
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