Roseiflexus sp. RS-1: RoseRS_3114
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Entry
RoseRS_3114 CDS
T00542
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RoseRS_3114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrs03021
]
RoseRS_3114
Transcription machinery [BR:
rrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RoseRS_3114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF7260
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ABQ91477
UniProt:
A5UXX4
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All DBs
Position
3912204..3913253
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AA seq
349 aa
AA seq
DB search
MSRTMHEQHPWDELDERQEIAGEGEMAPIADIEELAAENLEETLESDSTLDSIQHYLQEI
GRVPLLTAAEEVELAERMERGAAAARRLASAEDLSPQLRQALLDDVAAGQEARRHLIQAN
LRLVVSIAKKYVGRGLSLLDLIQEGNIGLMRAVEKFDHRKGNRFSTYATWWIRQAVTRAI
AEQGRTIRLPVHMSESVGQVKRAADRLAQVLERQPTPEEIATALGQPTERIERVLEASRR
PVSLEMPVGEDGEHTLGDFLQDSDLPTPVEAASHQLLRRDLAAALDRLNERERRIIDLRY
GLVDGQRRTLEEVGRVLGMTRERARQIEAEALRRLRAPDVGLHLRDYLE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaacaatgcatgagcagcatccgtgggatgaacttgacgagcgccaggagatc
gccggtgagggcgagatggcgccgattgcagatattgaggaacttgcagccgagaatctg
gaggagacgctggagtcggattcgaccctggattcgatccagcactacctgcaggagatc
gggcgggttccgttgttgacagctgccgaggaggtcgaacttgccgagcgcatggagcgc
ggcgctgccgccgcgcggcggctggcgtcggcagaggatctcagcccgcagctgcgtcag
gcgctgctcgatgatgtcgctgccgggcaggaagcgcgccgacatttgatccaggcgaac
ctgcgtctggtggtgagcattgccaaaaagtatgtcgggcgcggtctctcgctgctcgac
ctgatccaggaaggcaacatcggtctgatgcgcgccgttgagaagttcgaccaccgcaaa
ggcaaccgcttctcaacgtatgcgacctggtggatccgtcaggcggtgacacgcgctatc
gccgagcaggggcgcaccattcgcctgccggtgcatatgagcgagtcggtcggtcaggtg
aagcgcgccgccgaccgcctggcgcaggtgctggagcggcagccgacgccggaagagatt
gcgacggcgctcggtcagccgactgagcgtatcgagcgggtgctcgaggcgtcgcgtcgt
ccggtgtcgctggaaatgccggtcggcgaggatggggagcatacgctcggtgatttcttg
caggatagcgatctgccgacgccggtcgaagcagcgtcgcaccagttgctccggcgtgat
cttgccgcagcgctcgaccgcctgaatgagcgcgagcgacggatcattgatctgcgctac
ggtctggtggacgggcagcgccgcacgctcgaagaggtcgggcgggtgctggggatgacc
cgcgagcgcgcgcgccagatcgaggcggaggcgttgcgtcgcctgcgcgctcctgacgtc
ggtctccatctgcgcgattacctggagtag
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