Roseiflexus sp. RS-1: RoseRS_3161
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Entry
RoseRS_3161 CDS
T00542
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrs03016
]
RoseRS_3161
Transfer RNA biogenesis [BR:
rrs03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RoseRS_3161
Prokaryotic type
Methyltransferases
RoseRS_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
GCV_T
HflX_C
ABC_tran
cobW
AAA_29
MMR_HSR1_Xtn
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABQ91522
UniProt:
A5UY19
LinkDB
All DBs
Position
complement(3981263..3982678)
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AA seq
471 aa
AA seq
DB search
MPAGATRFCRMLYDDTIAAIATPPGEGGIGIVRISGRDALKILERIFVPVRPGRWKPYQM
RYGRVVDQNGAVVDEALAVFMRGPRSFTAEDTAEISVHGGPLVVERVLQQALAAGARAAA
PGEFTMRAFLNGRIDLAQAEATLDIITARTTTALALAEAQLGGWLSQELHRIRDLLMDPL
AYCTALVDFPEDEVDPQDIETPLTAAVQALDALVASAQHGIIYRQGARAALIGRPNAGKS
SLLNALLRVDRAIVTPIPGTTRDTLEETASLGGVPVVLTDTAGIVESDDPVERLGVARSR
QAVRLADLALLVVDVSLPVADDDREIVALTEEKRTILTLNKIDLIDADRSIIAARQREYE
QIRGKAFDAMVTVSALTGQGLDELGATVARLLLGAPIAADGRLVTNARHRDALARAADHA
RDALTGFQQGVSPDLLAVDLTAAINAIGEVTGESVGEDLLHAIFSRFCIGK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccggggcaacccggttctgtcgtatgctgtatgacgacacaattgcagccatt
gcgacgccgcccggcgagggtggcattggaattgtgcgcataagcggaagagatgcgttg
aagatcctggagcgcatcttcgtgccggtgcgacctggtcggtggaaaccctaccagatg
cgttatggtcgtgtggttgaccagaacggcgcagtcgtggacgaggcgctggcagtgttc
atgcgcggtccacgaagcttcactgctgaagacactgccgaaatatcagttcacggagga
ccgctggttgtcgagcgggtgctgcaacaggcgctggcggctggcgcgcgggcggccgct
cccggcgagttcaccatgcgcgctttcttgaatgggcggatcgatcttgctcaggcagaa
gcaacgcttgacataatcacagcgcgaacgacgacagcgctggcgctggcagaggcgcag
ttgggcggatggctctcgcaggaactgcaccgcatccgtgacctgttgatggacccgctg
gcatactgcacagcactggtcgattttcctgaagacgaagtcgatccgcaggacatcgag
actcccctgacggcggcagttcaggcgctcgatgcgctggttgcgtcagcgcagcacggg
atcatctatcgccagggcgcacgcgctgcgttgatcgggcgtccgaatgccggaaagtcg
agcctgttgaacgcactgctgcgcgttgatcgggcgattgtgacgccgatccccggcacg
acgcgcgatacgcttgaggaaaccgccagtctgggaggcgtgcctgtggtgttgacggac
accgcagggatcgtggaaagtgacgatccggtcgagcgtcttggcgtggcacggagtcgt
caggcggtgaggctggcagacctggcgctgctggtcgttgatgtgtcactcccggttgct
gacgatgaccgcgagattgtcgcgttgaccgaagagaaacgcacgatcctcacgctcaac
aaaatcgacctgatcgacgccgatcggtcgatcatcgcagcgcggcagcgtgaatatgaa
cagatccgcggcaaggcattcgacgcgatggtgaccgtctcagcattaaccggacagggt
ctcgacgaactcggcgcaacggtggcgcgtctgttgctgggtgcgccaatagcggcggat
gggcgtctggtgaccaatgcacgccatcgtgatgcactggcgcgcgcagcggatcatgcg
cgcgacgcgcttaccggtttccagcagggtgtctctcccgatctgctggcggttgacctg
acagcggcgatcaacgctatcggcgaagtgaccggcgagtcggtcggcgaggacctgctg
catgccatcttcagccggttttgtatcgggaagtga
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