Roseiflexus sp. RS-1: RoseRS_3415
Help
Entry
RoseRS_3415 CDS
T00542
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs03030
DNA replication
rrs03410
Base excision repair
rrs03420
Nucleotide excision repair
rrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RoseRS_3415
03410 Base excision repair
RoseRS_3415
03420 Nucleotide excision repair
RoseRS_3415
03440 Homologous recombination
RoseRS_3415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrs03032
]
RoseRS_3415
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_3415
Enzymes [BR:
rrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RoseRS_3415
DNA replication proteins [BR:
rrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RoseRS_3415
DNA repair and recombination proteins [BR:
rrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RoseRS_3415
NER (nucleotide excision repair)
GGR (global genome repair) factors
RoseRS_3415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
baeRF_family2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ABQ91773
UniProt:
A5UYS0
LinkDB
All DBs
Position
complement(4286078..4288975)
Genome browser
AA seq
965 aa
AA seq
DB search
MSNNRPLLLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVFGFTSAMLNAIEEYHPDYAA
VAFDVGKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTADGYEADDVIGT
LARQATERGVDVLILTGDTDTLQLVDEHVTVLLNNPYVRGSKNTTRYGVADVCARYKGLR
PDQLADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGSIENLYDHLDEAPKRYQKHLEGQ
RDAALFSKKLATIVRDAPVTLDLPAATLADYDRSRVIAVFQELEFGASLVRRLPPSQTIA
APQALPPVEPPAPLQVDMFAPATPGPDDGPQQLTLFNDMPTPVAPVVEPPAHDAPGEYRA
ACNDADLEAIVTELKHASLFAFDTETRGTNPLRDDLVGIALATIPGSGWYVPLGHTTGEA
QLPRERVIAALRPFFADPARSRIAHNAKFDIEVLERAGIPVAGVAFDTMLAAALLDKRRN
LKDLAFYELNLAAPLESIEALIGKGKNQVTFADVPIARATPYAAADADMTLRLKPALEAK
LRAAGSVADVFYRLEMPLVPVLVRMEQAGILLDVPYMRALGERMGRELEQIEQQIYAIAG
QTFNINSGDQLSEVLFGPKINLPTTGLDRTRTGRYSLTAQALEELQASDTTGIIELILRH
RRLSKLKSTYVDELPALVNPETGRVHTDYNQLGAATGRLSSNSPNLQNIPTRTEEGREVR
RGFIAAPGHLLIAADYSQIELRVLAHMTGDPNLIQTFIEGRDIHAATAARLFGVGFSAVD
KNQRRIAKTVVFGVIYGISPFGLAQRLGISREQARGLIDSLFDQFPRIRDYIDRTLDIGR
SEGYVQSLFGRRRPMFDLRVSGPRRQAAEREAINHPIQSTAADIMKLAMIAVDAELQRRQ
MRTRMLLQVHDELIFEAPEAEVDDVVALVRERMEGVLHGMEPPFAVPLRVEIETGPNWEE
LTPAG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaacaaccgtccgctgctgctgctgatcgatggccatgcgctggcgtaccgcgcg
ttccacgccctggcggaggctggtttacgctcttcgaccggcgagccgacgtatgcggtc
ttcggttttacgtcggcgatgctcaatgccatcgaggagtatcatcccgactatgcagca
gtggcattcgatgtcgggaagaccttccgcgacgacctgtacgccgaatacaaggcgaac
cgcgctgaaactcctgccgagttcgagcagcaactcgagcgcattaagcaagtgctggcg
gcgttcgacatcccgatctataccgccgatgggtatgaagccgacgacgtgatcggcacg
ctggcgcgtcaggcgacggagcgcggcgttgatgtgctgatcctgaccggcgataccgat
acgcttcaactggtcgatgagcatgtgacagtgctgctcaataatccctatgtgcgcggt
tccaaaaacacaacgcgctatggggtcgccgatgtgtgcgcgcgttacaaagggttgcgc
cccgatcaactcgccgatctgcgtgggttgaagggcgatccgtccgataatatccccggc
gtcaaagggatcggggaagcgggcgcaattgcgttgctcaatcagtttggctcaattgag
aacctgtacgatcatctggacgaagcgccgaaacgctaccagaagcacctggaaggtcag
cgtgacgcggcgttgttcagcaagaaactggcgacaattgtacgtgatgcgccggtgacg
ctcgaccttcctgccgcaactcttgccgactatgatcgcagtcgggtgattgctgtcttc
caggaacttgaattcggtgcgtcactggtcaggcgcctccccccgtcgcagaccatcgca
gcgccgcaggcgctgccgccggtcgagccgcctgcgccgcttcaggtcgatatgtttgcc
cctgcaacacctggaccggatgacggaccgcagcagctgaccctgttcaacgatatgccg
acgcctgttgcgccggtggttgagccgccagcgcacgatgcgcctggtgagtatcgcgcc
gcgtgcaacgatgctgatctggaagcaattgtcacagaactcaagcatgcgtcgctattt
gcattcgataccgagacgcgcggcaccaatcccctgcgcgacgatctggtgggcatcgcc
ctggcgacgatccccggcagtggatggtatgttccgctggggcataccaccggcgaggcg
caactgccgcgtgagcgagtcattgctgcgctgcgtccgtttttcgccgatccggcgcgc
tccagaatagcgcacaatgcgaagttcgacatcgaggtgctggaacgcgctggcatcccg
gttgccggtgtggcgttcgacacgatgctggcagcggcgctgctcgacaaacggcgcaac
ctgaaagacctggcgttctatgaactgaacctcgccgctccgctcgaatcgattgaagcg
ttgatcgggaagggcaaaaaccaggtgaccttcgccgatgtgccgattgcgcgcgccacg
ccgtatgccgctgccgacgccgatatgacgctgcgcctgaagccagcgcttgaagcgaaa
ctgcgcgcagccggcagtgtcgcagatgtgttctaccgcctggagatgccgcttgttccg
gtgctggtgcgcatggaacaggcaggcattctgcttgatgttccgtatatgcgcgctctt
ggtgagcgcatggggcgggaactcgaacagattgagcagcaaatctacgcaattgccggg
cagacattcaacatcaactccggtgatcagctgagcgaggtgttgttcggtcccaagatc
aacctgccaactaccggtcttgatcgcacccgaacggggcgctactcgctgaccgcgcag
gcgctcgaagaactgcaagccagcgacaccaccggcatcatcgagttgatcctgcgtcac
cgtcgcctgagcaaactcaaatcgacctacgtcgatgaactgccggcgctggttaacccg
gagaccggcagggttcataccgattacaaccagcttggcgccgcgaccggtcggttgagc
agcaactcgcccaacctgcaaaatattcccacgcgcaccgaagaggggcgcgaggtgcgg
cgcggtttcatcgctgcgccgggtcacctgctgatcgccgccgactattcgcagatcgag
ttgcgtgtgctggcgcatatgaccggcgatccgaacctgatccagacctttatcgagggg
cgggacatccacgcggcaactgccgcccggctgtttggcgtcggcttcagtgcggtggac
aagaatcagcgacggatcgcaaaaactgtggtttttggcgtcatctatggcatcagcccg
tttgggctggcgcagcggttgggtatctcgcgcgaacaggcgcgtggtctgatcgatagt
ctgttcgatcagttcccgcgtatccgcgactatatcgaccgcaccctcgacatcgggcgg
agcgaagggtatgtgcagtcactcttcggtcgtcgccgccccatgttcgacctgcgcgta
tccggtccacgccgccaggcagccgaacgtgaagcgatcaaccacccgatccagtccacg
gctgcggacattatgaaactggcaatgatcgcggtcgatgctgaactccagcgtcgacag
atgcgcacccggatgctgcttcaggttcacgacgaactgatcttcgaagcgccggaagcg
gaggtggacgatgtggtggcgctggtgcgcgagcggatggaaggcgtgttgcacgggatg
gaaccgccgttcgctgtgccgttgcgcgtcgagatcgaaacaggaccgaactgggaagaa
ttgaccccggcgggatga
DBGET
integrated database retrieval system
