Roseiflexus sp. RS-1: RoseRS_3446
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Entry
RoseRS_3446 CDS
T00542
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_3446
Enzymes [BR:
rrs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RoseRS_3446
DNA repair and recombination proteins [BR:
rrs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RoseRS_3446
Prokaryotic type
RoseRS_3446
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABQ91804
UniProt:
A5UYV1
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All DBs
Position
complement(4325962..4327437)
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AA seq
491 aa
AA seq
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MLWIHWFRRDLRLRDNPALSGAAARSGGRVIPLFILDDAILHAPRTGMARVAFMIAALRD
LDASLRARGSRLVVRRGRPSDVLRDLVGATGAVGVSWNRDYTPFARQRDQHIEAMLRDLN
VATFIAADAVIMEPDDVRTDDGRPYTVYTPYRRRWRALVEQRRDDVLRAYEPPVLQPVPD
GVADLPIPDNPDLDVSVIQRIPAGGETTGAARLAAFLDPRATHGIAGYADGRNLLAEPAT
SRLSPYLRFGCVAPRAALRAALNLLDRAGEEQDAECAATLTRSIETWIGELAWRDFYYQI
LWHHPHVLRSAFKPQYDALEWENDPALFDAWKEGRTGYPVVDAAMRQLNREAWMHNRARM
IVASFLTKDLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTGTDAQPYFRIFNPVSQG
QTFDPKGAYVRRYLPELEAVPDRYIHAPWTMPYAEQQRCGVIIGRDYPAPVVDHAERRAR
ALALYRAVSSR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggattcactggtttcgccgcgatctgcgcctgcgcgacaatccggcgctctcc
ggcgcggctgcccgcagcggcgggcgggtcattccgttgttcattctcgatgacgccatc
ctgcatgcgccacgcaccggcatggcgcgggtagcgttcatgatcgcggcgctgcgcgac
ctcgacgccagcctgcgcgcgcggggcagtcgcctggtggtgcgacgtggacgaccatcc
gacgtgctgcgcgatctggtgggtgcgaccggcgccgtcggcgtctcgtggaaccgcgat
tataccccgtttgcgcgccagcgcgatcagcatatcgaagcaatgctgcgcgatctgaac
gtcgcaacgttcattgctgccgacgccgtcattatggaacccgacgacgtgcgcaccgat
gacggacgaccatacacggtctacacgccgtaccggcggcgctggcgcgcgctggtggaa
cagcgccgcgacgatgtgttgcgcgcatacgagccgccggtgttgcaaccggttcctgat
ggcgtggcggatcttcccatccctgataatcctgatctcgacgtgtcagtcatacagcgg
atccccgctggcggtgaaacgactggagctgcgcgcctggcggcgttcctcgatccgcgc
gccacccatggaattgcggggtacgccgatggacgcaacctgctggctgaaccggcgacc
tcgcgcttatccccctatctgcgatttgggtgcgtcgcgccgcgcgctgccctgcgcgcc
gcgctgaacctcctcgaccgggcgggtgaagaacaggacgccgaatgcgccgcgacgctc
accaggtcaatcgaaacctggatcggcgagcttgcctggcgcgacttctactaccagatt
ctctggcatcatccccatgtgctgcgcagcgcgttcaaaccgcagtacgacgcgctcgaa
tgggaaaacgatcccgcgctgttcgatgcctggaaagaaggacgcaccggctacccggtt
gtcgatgctgcgatgcgtcagttgaaccgggaagcctggatgcacaaccgggcgcgtatg
attgtcgcttcctttctgacgaaagacctgctgatcgactggcgctggggcgaacgctat
ttcatgcaacaactggtcgatggcgatcacgcggccaacaacggcgggtggcagtggagc
gcgggaaccggcaccgatgcgcaaccctacttccgcatcttcaaccctgtcagtcagggg
caaacgttcgatccaaagggtgcgtatgtgcggcgttatctaccagaactggaagcggtt
ccagaccgctacattcatgcgccctggacgatgccgtatgctgaacagcagcgttgcggc
gttatcatcgggcgggactatccggcgccggttgtggaccatgccgaacggcgggcgcgc
gcgcttgcgctctatcgcgccgtctcttcgcgttga
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