Roseiflexus sp. RS-1: RoseRS_3648
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Entry
RoseRS_3648 CDS
T00542
Name
(GenBank) AMP-dependent synthetase and ligase
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00061
Fatty acid biosynthesis
rrs00071
Fatty acid degradation
rrs01212
Fatty acid metabolism
rrs02024
Quorum sensing
rrs04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RoseRS_3648
00071 Fatty acid degradation
RoseRS_3648
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RoseRS_3648
09145 Cellular community - prokaryotes
02024 Quorum sensing
RoseRS_3648
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABQ92003
UniProt:
A5UZF0
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Position
4562347..4563906
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AA seq
519 aa
AA seq
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MLVHDFLINSAARLPDKVALVCDGHRMTYRDLDLMTNRLARALVEHGVGRGDRVAIFMPN
SVEAVVGIFAALKAGGVFVVINHTTKQDKLTAILNNCRAAALIADAQIRDVHLSALLHDA
PSLRVGVLCNQGAAARITHPRFIDFDAVQAQYDAAPLPRVTIDLDLACLIYTSGSTGEPK
GVMSDHSNVVFASESIITYVQNVEDDVVINMLPLSFDYGLYQLLMTFRFGGRLVLERSFA
YPAAILRRIEEERVTGFPGVPTIYALLLQMDLSRYDLSSIRYLTNTAAALPPSHVLELRR
TFHWARLYSMYGLTETKRTLYLPPEEVERRPGSVGIAIPGTEVWIEDEQGNRLGPGEVGE
LVVRGRHVMRGYWEAPEATAQRFRPGPLPGERVCYTGDLFRMDADGFLYFVGRKDDIIKS
RGEKVAPKEVENVIYELPGVVAVAVVGVPDPILGQAIKAFVVTKNADLTEMQVLAHCRSR
LEDFMVPRYVEFRDELPVNTSGKIARRELTQALNADRST
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgctggtccatgactttctgatcaacagcgccgcgcgattgccggataaggttgcgctg
gtgtgcgatggacaccggatgacctaccgcgacctcgatctgatgaccaatcgcctggcg
cgcgcgctcgtggagcatggcgtcgggcgcggtgatcgggtggcgatcttcatgcccaac
tcggtcgaagcggtggtcgggatttttgctgcgctcaaggcgggcggcgtcttcgtggtc
atcaaccatacgaccaaacaggacaaactaaccgccattctgaacaactgtcgcgccgct
gcgctgattgccgatgcgcagatcagagacgtacatttgtcggcgctgctccacgatgcg
ccatcgctcagggttggcgtgctgtgcaatcaaggcgctgctgcccgtatcacccatcca
cgtttcatcgatttcgacgctgtgcaggcacagtacgacgctgcgccgctcccgcgcgtc
actatcgatctcgacctggcgtgcctgatctacacttcgggcagcaccggggaaccgaag
ggggtcatgagcgatcacagcaatgtcgtctttgccagcgagtcgatcatcacctatgtg
cagaatgtcgaagatgatgtcgtcatcaacatgctgccgctttccttcgattatggtctc
taccagctgctcatgaccttccgtttcggcggcagactggtgctcgaacgctcgtttgca
tatcctgcggcgatcctcaggcgcatcgaggaagagcgtgtcaccggttttcccggcgtt
ccgacgatctatgcccttctcctgcagatggatctgagccgctacgatctgtcgagcatc
cggtatctcacgaacactgctgccgcgttgccccccagccacgtgctggaactgcgtcga
acctttcactgggcgcgcctctactcgatgtacggtctgaccgaaaccaaacgcacgctc
tacctgccgcccgaagaagtggagcgtcgccccggttcggttggcattgccattccgggt
accgaggtctggatcgaagatgaacaggggaaccgcctcggaccgggtgaggttggcgaa
ctggtggtgcgtggacggcacgtgatgcgcggctactgggaagcgccagaagccacggca
cagcgtttccgccccggtccgctgccgggtgagcgtgtgtgctacaccggcgacctgttt
cgcatggatgccgatgggtttctgtacttcgtcgggcgtaaggacgacatcatcaaaagt
cgtggtgaaaaagtcgcacccaaagaagtcgaaaacgtcatttacgaactgccgggcgtg
gtggcggtcgcagtggtgggtgtccccgacccgatcctggggcaggcaattaaggcattc
gttgtcacaaagaatgccgatctgacagagatgcaggttctggcgcactgccgttcgcga
ctggaagatttcatggtgccgcggtacgtcgagttccgcgatgaactgccggtcaacacg
tcaggaaaaattgcccggcgagaattgacacaggcgttgaacgctgaccgttcaacctga
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