Roseiflexus sp. RS-1: RoseRS_3722
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Entry
RoseRS_3722 CDS
T00542
Name
(GenBank) alpha amylase, catalytic region
Organism
rrs
Roseiflexus sp. RS-1
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
ABQ92076
UniProt:
A5UZM3
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Position
complement(4658678..4660618)
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AA seq
646 aa
AA seq
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MTFVRDMLSRPRPPRIRHDVQLPRRVAYYPSPVDWRDEVIYFLMVDRFSDGQEDTRPLLD
RRYLAAARPALPNGDPWRWDRWALSGGERFQGGTLRGIISKLGYLQRLGITTLWLSPVCK
QRVHLDTYHGYAIQDFLDVDPRFGTRQDLVDLVSAAHERGMRVLLDIVFQHTGPNWRYPP
DVPGGADMPRYTSGRYPFGSWVDAAGAPLVGIPDVNDAAWPEEMRTIDYYTRAGAGDLGA
GAIDDPDAEHKRSDFFTLRDINLDAPGALTDLALCYKYWIALTDCDGFRIDTLKHVSFEQ
ARNFCGTIKEFAANLGKANFFLVGEVAGGDFAATRYLDALERNLNAALDIGEMRLALGDV
AKGLAPARAYFDGFVPGLAIMGSHRNLGSRHISILDDHDHVFGTKLRFSTDVMSQHHAAA
AVALQLFTLGIPCIYYGTEQALGGPEPSERQWLPEWGRADRYLREAMFGPLHPRASGRAG
IDPQALDTSLPGFGPFGTAGHHCFDERFPVYLRIAALAALRAAFPVLRHGRQYLRPISNF
NQPFAFPPAGEIVAWSRILDDEEALCVINPNGLAARGGDVVVDAALNRPGDTMTVILNTA
QAADPDGYDGLYPKGRQLTVRERNGTSYVEIRNLPPAETLVLTNRP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgtccgcgatatgttaagccgaccacgcccgccacgcatcaggcatgatgtt
cagttgccgcgtcgggttgcatactacccgtcaccggtcgactggcgtgacgaggtgatc
tactttttgatggttgatcgcttcagcgatggacaggaagatacccgcccgttgctcgac
cggcgctacctggcggcagcgcgaccggcgctgcccaacggcgacccctggcgctgggat
cgctgggcgttgtcgggcggtgaacgatttcagggcggcacgttgcgtggaatcatatcg
aaactcggctatctgcagcggctcggcatcaccaccctgtggctcagcccggtctgcaaa
cagcgcgtccacctcgacacctatcacggctatgccattcaggattttctggatgtcgat
ccgcgcttcggcacgcgccaggacctggtcgatctggtgagcgctgcgcatgagcgtggc
atgcgggtattgctcgacatcgtgttccagcacaccggtcccaactggcgctacccgccc
gatgttcccggtggcgcagacatgccgcgctatacgagcgggcgctacccgttcggcagt
tgggtcgatgctgcgggtgcgccgctcgtgggcattcctgatgtgaacgatgctgcctgg
cccgaagagatgcgcacgatcgactattatacgcgcgctggcgccggcgatctgggcgct
ggcgctatcgatgatccggatgccgagcataaacggtcggactttttcacgctgcgcgac
atcaatctcgatgcgccgggcgcgctcaccgatctggcgctgtgctacaaatactggatt
gcgttgaccgactgcgatgggtttcgaatcgatacgctcaaacatgtctcattcgagcag
gcgcgcaatttctgcggcacgatcaaggagttcgccgccaacctgggcaaagcgaacttc
ttcctggtcggcgaagtcgccgggggcgattttgccgcaacacgctacctcgacgcgctg
gagcgcaacctgaatgccgcactcgatatcggcgaaatgcgcctggcgctcggagatgtt
gcaaaggggctggcgccagcgcgcgcctatttcgacgggttcgtgccggggctggcaatc
atggggtcgcaccgcaatctcggcagtcgccatatctcaatcctcgacgatcacgaccac
gtttttggaacaaaactccgtttctcaaccgatgtgatgtcgcagcatcatgcggcggca
gcagtcgcactgcaactcttcacgctcggcattccatgcatctattacggcaccgaacag
gcgctcggcggtcctgaaccatcggagcgacagtggttgccggagtggggacgcgccgac
cgctacctgcgcgaggcgatgttcggtccactccacccgcgcgcgtccggtcgcgccggg
atcgacccccaggcgctcgatacatcgttgccaggatttggaccttttggcactgccggg
catcactgcttcgacgagcgctttccagtctacctgcgcatcgcggcgctggcagccctg
cgcgccgccttcccggtgttacgccacggtcgccagtatctgcgcccgatttcaaacttc
aaccagccattcgcattcccgccagccggagaaatcgtcgcctggtcgcgcatcctcgat
gacgaggaggcgttgtgcgtgatcaatccgaatggtctggcggcacgtggcggcgatgta
gtggtcgatgccgcactgaaccgccccggtgataccatgacggtcatcctgaataccgcc
caggccgctgatccagacggctatgacggtctgtatcccaaaggacggcaattgacggtt
agagagcggaatggaacgtcgtatgttgaaattcgcaacctgccgccagccgagacgctg
gtgctgacaaaccgaccatag
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