Roseiflexus sp. RS-1: RoseRS_3800
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Entry
RoseRS_3800 CDS
T00542
Name
(GenBank) putative PAS/PAC sensor protein
KO
K17763
rsbT co-antagonist protein RsbR
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrs03021
]
RoseRS_3800
Transcription machinery [BR:
rrs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RoseRS_3800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS
STAS
PAS_8
PAS_4
PAS_3
STAS_2
DivIC
bZIP_2
TSC22
MAD
Motif
Other DBs
NCBI-ProteinID:
ABQ92154
UniProt:
A5UZV1
LinkDB
All DBs
Position
4753901..4755193
Genome browser
AA seq
430 aa
AA seq
DB search
MSSETITRLEAENAALRQRINELEMRLEAYHTGNAMLRTTGHTGAFNEFQGFRTTVERAS
QGIVIVHLEGVITYVNSAFCALTGYHALVGRHISTLYFEYDLPLLDRGLQKVRYDGIWQD
NISLRRSDGAAIPVHIDAFLICDDAGQPAAITVIVEDLTEELRREERLRLFEALVENAPD
AIGVANVRGNVIYANTAYQTLTGCGDQLIGMNAFDGIVEHDRQAVRTALARLEDNNAVVL
DIRIQRRDGGIAPVSAAMYAQRSPRDEVWLIGFLRDISDQKRAEAERFALQQQVIEAQRA
AIRELSTPLIPISETAVIMPLVGAIDSARAQQIIDTLLEGVAAHRADVAIVDITGVQVVD
TQVASALVRAAQAVRLLGAQVILTGIKPQVAQTLVQLGVSLEGIRTTGSLQTGIRLALDH
DAIRRKGAGR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaaactataaccaggcttgaagctgaaaacgccgcgttgcgtcagcgtatc
aacgaattggaaatgcgcctcgaagcgtatcacacgggcaacgccatgctccgtacaacc
ggtcacaccggcgccttcaatgagtttcaaggatttcgtactacggtcgagcgtgcatca
cagggcattgtgatcgttcatctcgaaggcgtcatcacctatgtcaattctgcattttgt
gcattgactggctatcatgcacttgtcggcaggcatataagcacgctctatttcgagtac
gatctcccattgctggacaggggcttgcagaaagtcaggtacgatggcatctggcaggac
aacatctcgttgcgccgcagcgatggcgctgctatcccggtgcatatcgacgcttttctc
atctgtgatgatgccggacaaccggcggcgataaccgtcattgtcgaggatctgaccgaa
gaactccggcgtgaggagcggctgcgcctgttcgaggcgctggtcgaaaacgcccccgat
gccatcggcgtcgctaatgtcaggggcaatgttatctacgccaacactgcgtatcagacg
ttgaccggctgtggcgaccagctcatcggcatgaatgccttcgatggcatcgtagaacat
gatcgccaggcagtgcgcacagcgctggcgcgtctggaggacaataacgcagttgtgctc
gacattcgcatccagcgcagggacggcggcattgcgccggtgtcggcagcgatgtatgcg
cagcgatctccgcgcgacgaggtgtggctcatcggcttcctgcgcgacatcagcgaccag
aaacgcgccgaggcggaacgcttcgcgctccagcagcaggtgatcgaggcgcagcgcgcc
gccatccgcgaactctccaccccgctcattccgatcagtgagacggcggtgattatgccg
ctggtcggcgccatcgacagcgcgcgggcgcagcagatcatcgacaccctgctcgaaggg
gtcgccgcccatcgcgcggacgtggcgattgttgacatcaccggggtgcaggtggtcgat
acgcaggtcgccagtgcgctggtgcgcgccgcacaggcggtgcggctgctgggggcgcag
gtgatcctgaccggcatcaagccgcaggtggcgcagacgctggtgcagttgggggtcagt
ctggaaggcatccgcaccaccgggtcgctccagaccggcatacgtctggcgctggatcac
gatgccatccggcgaaagggcgccggacgctaa
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