Roseiflexus sp. RS-1: RoseRS_3863
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Entry
RoseRS_3863 CDS
T00542
Name
(GenBank) Laminin G, sub domain 2
Organism
rrs
Roseiflexus sp. RS-1
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-ProteinID:
ABQ92216
LinkDB
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Position
complement(4828721..4833847)
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AA seq
1708 aa
AA seq
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MRIQMWVGGIFGVLIVLIALAAPSASQATIPNRQTWAHSPGTCGPALEGAVFGRAGDNCG
GGGTTFDSNNVEGPVILRDIATAAAPCPGIAEGATCYRMWYTGFDTGGVRRIGYAVSPDG
TTWTRVPGSAGGGAVLGLGPAGNFDSAGVSFPYVVRNGATFEMWYNGFNGSVFTIGFATS
TDGLNWTRVTGPLSQGAVLRPTGAATFDQSIVAAPSVIRDESSAQLPCENGRTTGICYRM
WYQGTDAANVFRIGYALSPDGVNWTRAAGGNAVLGTGAGGTWDAGSVGAPVVVKDGALFR
MWYNSQASNQSIGHVVSTDGVTWVRPEPNQAVYRGADDPGALSPDNVWTPFVIKEGASFR
MWYTISSRPNAIRIGHATMTPGTLLPAPGLTRNLGEYTLSLTTQAIPAGGSVLLTLPASI
PFTEVTAGAIDGFGANATFAAEATALTDAAAQGTARGALVIRLPDGAPAGPKTITFTLAN
PPSSAALMTVQTFDIREVLEYATVDLSQATDVGPTPTPTPVPPSPTPVTPTPTATEGPTA
TPTPVPPSPTPVTPTPTATEGPTATPTNTPQPPTATSTPTATSTPQPPTATSTPTATSAP
TATPALTADPSNRQPWLHIPGTCPASAQGAVFTIAGQNCGGAGTSFDTSEIFPPMVLRDN
ATPSLPCENGRTSGICYRMWYVGVDGSGTRRIGHALSPDGITWTRYIGSGVGGSVFGPSG
VAGDFDSNGVTTMYVVRDGNTFRMWYSGFSNTGAIEGIGYATSPDGITWTRVPGTAGTAP
PNRNAVLVERGGAGDFDQDYIVAPSVLIDEATPALPCENGRTSGRCYRMWYEGVNNVGAY
TFAIGYAVSPDGINWTRVPGSSGGGAVFARINNFTDFDSNSVGVPTVIKDGAFFRMWYEA
KSYARPDFSTGYVVSTDGINWVRPIPNDPVFTGANDPGTFSPDGVWAARALKLGSSYRKY
YTVSTRPNAQRFGLAQMTPGAPLGSIALNASGDLYTLSFTTASFIPAGGSVLITLPPEVD
FAQVTPGAISGFGAGATLEADPAAVTDAASGGAARGALLVRLPNGAPVGPKTVQFSLTTP
PPSTAPLLVQTFDLREVLEYGEVMMNGTPPPATPTATPLPPTSTPTATPVPPTSTPVSPS
ATAGSTATPVPPTSTPTATPVPPTSTPTATPVPPSNSALRFDGANDEVRGGQIAGLGGAQ
TIELWVRPATGGQDSVILATTDDVIGWALELNGGRATWWVASTAGWRAAQHPTALLANTW
HHVAVTYDGTTARVFVNGAPGPAATIGAITQGPSFRIGGFPGYGFFNGDVDDVRISNIVR
YTSTFTPPSAAHPTDANTRALYRLDEGSGQTTADASGNGYNLTLGTTANADSADPQWVAS
TAPIAPPPTATPTAVPPTSTPTATPAPPTNTPTATPVPPTSTPVPPSATTEPTATPLPPT
STPTAGPTATPAPPTSTPTATPVPPTSTPTATPVPPTSTPTATPVPPTSTPTATPVPPSN
SALRFDGANDEVRGGQIAGLGGAQTIELWVRPTTGGQDSVILATTDDVIGWALELNGGRA
TWWVASTAGWRAAQHPTALLANTWHHVAVTYDGTTARVFVNGAPGPAATIGAITQGPSFR
IGGFPGYGFFNGDVDDVRISNIVRYTSTFTPPSSTSLTTDANTRAFYRFNEGSGQTTVDA
SGNGYNLTLGTTANADSADPTWVASTAP
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgcggattcagatgtgggttggcgggatctttggcgtgctgattgtgctgattgcgctg
gcagcgccatctgcgagtcaggcgacgatccccaatcgccagacatgggcgcattcgccg
ggaacgtgcggaccggcgctggaaggagcggtgttcgggcgtgccggagacaactgcggc
ggaggtggcacaacattcgatagcaacaacgtcgaaggtccggtcattctgcgcgacatc
gccacggctgcggcaccctgtcccggcatcgccgaaggggcgacgtgttatcgcatgtgg
tataccggcttcgacaccggcggcgtccggcgcatcggatacgccgtttcgccagatgga
acaacctggacgcgcgtgccgggaagcgccggcggtggtgcagtcctcggtctgggaccg
gcggggaacttcgatagcgccggggtatcgttcccctatgtcgtccgcaacggcgcgacc
ttcgaaatgtggtacaacggcttcaacggctcggtctttacgattggcttcgccacctcg
accgatgggctgaactggacgcgcgtgacaggaccgttgtcccagggcgcggtgctgcgt
ccaaccggcgcagccacgttcgaccagtcgattgtcgctgctcccagcgtgatccgcgat
gaatcctctgcgcaactcccctgcgaaaatggacgcaccaccggcatctgttaccgcatg
tggtatcagggaaccgatgcggcgaatgtctttcgcatcgggtatgcactctcgccggat
ggcgtgaactggacgcgcgccgctggcggtaacgcagtgctcggcacaggcgctggcggc
acatgggatgccggcagcgtcggcgcaccggtggtggtgaaggatggcgcactgttccgc
atgtggtacaacagccaggcatccaaccagagcatcgggcatgtcgtctcgaccgatggg
gtgacgtgggtgcggcctgagccaaaccaggcagtgtaccgcggcgctgacgaccccggc
gccctttcacccgacaacgtgtggacgccgttcgtcatcaaggaaggcgcttccttccgc
atgtggtacaccatcagcagccgccccaatgccatacgcatcgggcatgcgaccatgacc
cccggaacgctgctgcctgcgcctggattgacccgtaatctcggcgaatacaccctctcg
ctgacgacccaggcgattccggcaggcggcagtgtcttgctgacattgccggccagcatt
ccattcaccgaagtgacagcaggcgcgattgacggctttggcgcaaatgcgacattcgcg
gctgaagcgacggcgttgaccgatgctgcggcgcaggggacggcgcgcggcgcgctcgtc
atccggttgcctgacggcgctcccgctggtccgaagacgatcaccttcaccctggcaaac
ccgccatcgagtgcggcgctgatgaccgtgcagactttcgatatacgcgaagtgctggaa
tatgcaacggttgatctgtcgcaggcaacggatgtcggaccgactccgacgccgacgccc
gttccgccctcgcccacgccggtgacgcccaccccgaccgccaccgaaggtccgacggcg
acgccaacgcccgttccgccgtctcccacgccggtgacgcccaccccgaccgccaccgaa
ggtccgacggcgacgccgacaaatacgccacagccgccaacggcaaccagtacgccaacg
gcaaccagtacaccccaaccgccgacggcaaccagtacgccgacggcaacgagtgcgcca
actgcgacgcctgcactaactgccgatccgtcgaaccgccaaccgtggttgcacattccc
ggaacctgcccggcatctgcccagggcgcagtatttacgattgccgggcagaactgcggc
ggtgcgggaacgagttttgacacgtcggagatcttcccgccgatggtgctgcgcgataac
gccaccccatcgctgccgtgcgagaatgggcgcaccagcggcatctgctaccgcatgtgg
tacgttggtgtggacggcagcggcacgcgccgtatcgggcatgccctgtcgccggacggc
atcacctggacgcgctacatcggctcaggagtcggcggaagcgtcttcggaccgtcgggc
gttgccggcgacttcgatagcaatggcgtcacgacgatgtatgtcgtgcgtgacgggaat
acgttccgcatgtggtacagcggcttcagcaacaccggtgcgattgagggcatcgggtat
gcaacgtcgccggatggcatcacctggacgcgggtgccgggcactgccggaaccgctccg
ccgaaccgcaacgccgttctcgtcgaacgcggcggcgccggtgatttcgatcaggattac
attgtcgcgccctccgtgctgatcgatgaagcaaccccggccctgccctgcgaaaatggg
cgcaccagcggtcgctgctaccggatgtggtacgagggtgtcaataatgttggcgcctat
acgttcgccatcgggtatgccgtgtcgcccgacgggatcaactggacgcgggtgcccggc
agcagtggcggcggcgccgtctttgcgcgcatcaacaacttcaccgacttcgacagcaac
agtgtcggcgttcctaccgtgatcaaggacggcgcgttcttccgcatgtggtatgaggcg
aaatcatacgcgaggcccgatttctcgaccgggtatgttgtctcaaccgatggcatcaac
tgggtgcgcccgataccgaacgatccggtcttcaccggcgccaatgatcccggcacattc
tcgccggacggcgtgtgggcggcacgggcgctcaaactgggcagcagttaccgtaagtat
tacacggtcagcacacgaccgaacgctcaacgctttgggctggcgcaaatgacccccggc
gcgccgcttggctcgattgcgctgaatgcgtctggcgatctgtatacgctcagttttacg
accgcatccttcattccggctggcggcagcgttctgatcaccctccccccggaggtcgat
ttcgcacaggtgactcctggtgcaatcagcggtttcggtgcgggcgcaacgctggaggcg
gacccggcggcagtcaccgatgcggcatccggcggcgcggcgcgcggtgcgctcctcgtt
cgcctgcccaacggcgcgcctgtgggtccaaagacggtgcagttcagcctcaccacgccg
cctccttcgaccgcgccgctgctggtgcagacgttcgatctgcgtgaggtgctggagtat
ggcgaggtgatgatgaacggcacgccgccgcctgccaccccaaccgccacgccgctgccg
cccaccagcaccccgaccgccacgccggtcccgcccaccagcacgccggtctcgccgtcg
gcgaccgcaggatcaaccgccacgccggtcccgcctaccagcacgccgactgccacgccg
gtcccgcccaccagcaccccgaccgccacgccggtcccgccgtcgaacagcgcgctgcgc
ttcgacggggcgaatgatgaggtgcgcggcgggcagatcgccggattgggcggcgcgcag
accatcgaactctgggtgcgtccggcgaccggcgggcaggatagcgtcatcctcgccacc
accgatgatgtcatcggctgggcgctggaactgaacggcgggcgcgccacctggtgggtc
gcgtcgaccgctggctggcgcgcggcgcaacacccgacggcgctgctcgccaatacctgg
caccacgtcgccgtgacctacgacgggacaaccgcgcgggtgttcgtcaacggcgccccc
ggaccggcggcgaccatcggcgcgatcacccagggaccgtccttccgcatcggcggcttt
cccggctacggcttcttcaacggcgatgtcgatgatgtgcgcatctcgaatatcgtgcgc
tacaccagcacgtttacgccgccatcagcagcacacccgacggacgcaaatacgcgcgcg
ctttatcggttggacgaagggagcgggcagacaacggcggacgcttccgggaatggctac
aacctgacgctcggcacaacggcgaatgctgacagcgccgacccgcagtgggtggcgtcg
accgcgccgattgcgccgccgccgacggcaacgccaacggcagtcccgcccaccagcacc
ccaaccgccacgccagcgccgcccaccaatacgccaaccgccacgccggtcccgcccacc
agcacgccggtcccgccgtcggcgaccacggaaccaaccgccacgccgcttccgccgacc
agtacgccgaccgcaggaccaaccgccacgccagcgccgcccaccagtacgccgaccgcc
acgccggtcccgcccaccagcacgccgactgccacgccggtcccgcccaccagtacaccg
actgccacgccggtcccgcccaccagcaccccgaccgccacgccggtcccgccgtcgaac
agcgcgctgcgctttgacggggcgaatgatgaggtgcgcggcgggcagatcgccggattg
ggcggcgcgcagaccatcgaactctgggtgcgcccgacgaccggcgggcaggatagcgtc
atcctcgccaccaccgatgatgtcatcggctgggcgctggaactgaacggcgggcgcgcc
acctggtgggtcgcctcgaccgctggctggcgcgcggcgcaacacccgacggcgctgctc
gccaatacctggcaccacgtcgccgtgacctacgacgggacaaccgcgcgggtgttcgtc
aacggcgcccccggaccggcggcgaccatcggcgcgatcacccagggaccgtccttccgc
atcggcggctttcccggctacggcttcttcaacggcgatgtcgatgatgtgcgcatctcg
aatatcgtgcgctacaccagcacgtttacgccaccgtcgtctacaagcctgacgactgac
gcaaatacgcgcgcgttctaccgcttcaacgaggggagcgggcagaccacggttgatgct
tccgggaatggctacaacctgacgcttggcacgacggcgaacgccgacagcgccgatccg
acgtgggtggcgtcaaccgcgccataa
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