Roseiflexus sp. RS-1: RoseRS_3878
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Entry
RoseRS_3878 CDS
T00542
Name
(GenBank) response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rrs
Roseiflexus sp. RS-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
Response_reg
PAS
PAS_4
PAS_9
PAS_8
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ABQ92231
UniProt:
A5V028
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Position
4855015..4857693
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AA seq
892 aa
AA seq
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MPPHILVITDDDDNRALLIRLLQSQGQQVAVAVDGQEALELLSRQVFDLILLDLDAADPD
MREVETLRQLCQYATVHSIPVAVIADAGNLDLITRCIELGADDYLLKPFNETLLRARVHA
LLERKAWRDRQRALPEESPRAPADAAAEVAPSAGGLWFALLDALGRAWRDQRRITTELQA
LETRIAEYSATVEDTALALRQQTITLHAILESLSDAVVVIDREGNLVHANPVAHTLFGDR
LLDVTPQATAPALLDTDGVPCATDQLPLAIALRGVEVDSSEFLLASVDPDAVRRIRATAR
PLRDSNGDIIGSVAIFRDITVSFQMAQALRASEERYTLTVQATGDGVWEWELRTGIMTFS
RRWKEMLGFQDQEIGNLPSEWFNRVHPDDRDGLDVRLTAYLRRLITSFEHEYRILHRDGA
YRWMRCRGIAIWDADGNAAHIVGSQTDITDRKLAEQRLWYNAFHDSLTGLANRARFMDRL
GHVIARARRSASPPYAVLILDLDRFKLINDSLGHLVGDQLLIAIARRLEQSLRPGDTLAH
LGGDEFAVLLEDLSEPHAAVNVAERILHLFEEPFHLNEHEVFSSASIGIALSDNLRYHSP
SDMLRDADTAMHHAKMEGRARYAVFHPTMHDRARPRLQIEIDLRRGIERNEFFVVYQPIV
ELSTQRTVGFEALLRWRHPQRGIVTPAEFIAIAEETGLIVPIGQMVLREACRQLSAWKQR
HPERTLAMNINLSPRQIADPDLVHRTAALIDEYRLDADALRLEITETAIIEHGDAAGRVL
QQLRALGVQICIDDFGTGYSSLSYLHRFPIATIKIDRSFVSQIHRSHENTEIVRSIISLA
RSLGMAVIAEGTETEEQLLRLRSMSCAYGQGWLFAHALEPAEATAMLDRETE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacacattctggttattaccgacgatgatgacaatcgggcgctgctcattcgc
ctcttgcagagccaggggcaacaggtggcggttgccgtcgacgggcaagaagcactggaa
ctcctttcccgtcaggtgttcgatctgatcctgctcgaccttgacgccgccgatccagat
atgcgcgaggtcgagacgctgcgacaactctgccagtacgcgacggttcacagcataccg
gtggcagtcatcgccgacgctggcaatctcgatctgattacgcgatgcattgaacttggc
gcagatgattatctgctcaaaccgttcaacgagacgttgctgcgtgcgcgtgtccatgct
ctgctcgaacgaaaggcgtggcgcgaccgccagcgcgcgttgccggaggaatcgccgcgt
gcgcccgctgacgcagcggcagaggttgcaccgtctgctggcggtctatggttcgcgctg
ctcgatgctctggggcgcgcctggcgcgatcaacgccgcatcaccaccgaactccaggcg
ctcgaaacacggatcgcggaatatagtgcgactgttgaggacactgcgctcgcgctccgg
caacagacgatcacgctccacgcgatcctggagagcctcagcgatgctgtcgtcgtgatc
gatcgtgaaggaaatctggtgcacgccaacccggtagcgcatactctctttggcgaccgt
cttctcgatgtaacgccccaggcaaccgcaccagcgctgctcgacacggatggcgttccg
tgtgcgaccgatcaactgccgcttgccattgcgctgcgtggcgtggaggtcgatagcagc
gagtttctgctggcttcggtcgatcctgatgctgtgcgtcgcatcagggcaactgcccgt
ccgctgcgcgacagcaatggcgacataattggatcagttgccatcttccgcgacatcacc
gtatcgtttcagatggcgcaggcattacgcgccagcgaagaacggtacacgctgaccgtg
caggcaaccggcgacggcgtatgggaatgggaactgcgcaccggaataatgacattctcc
cggcgttggaaggaaatgctgggctttcaggatcaagaaatcggaaaccttccttcagaa
tggttcaaccgggtgcatcccgatgatcgcgatgggctggatgtgcgcctgaccgcctat
ctccgacggctgatcaccagtttcgagcatgaatatcgcatattgcaccgtgacggcgcc
taccgctggatgcgctgtcggggcattgcgatctgggatgctgacggaaatgcggcgcat
attgtcggctcgcaaaccgatataaccgatcgcaaactggcggaacaacgtctgtggtac
aacgccttccacgatagcctgaccggtcttgccaaccgtgcgcgcttcatggatcgtctg
gggcatgtgattgcgcgcgcgcgacgcagcgcgtcccccccctatgccgttctgatcctc
gatctcgaccggttcaaactgatcaatgacagcctggggcatctcgtcggcgatcaactg
ctgatcgccatcgcccgtcgtcttgagcaaagcctgcgaccgggcgataccctggcgcac
ctcggtggcgatgagttcgccgtgctgctcgaagatctgagcgagccgcatgccgctgtg
aatgttgcagaacgcatcctgcatctgttcgaagaaccgtttcatttgaacgagcacgag
gtgttcagcagcgccagcatcgggattgcgctcagcgacaatctgcgctaccactcacca
tccgatatgctacgcgacgccgatacggcaatgcaccatgcgaaaatggaagggcgggca
cgctatgccgttttccatccgaccatgcatgaccgcgcgcgcccccgcctgcaaatcgag
atcgatctgcgtcgcggcatcgaacgcaacgagttcttcgtcgtctaccagccgatcgtc
gaactcagcacccagcgaacggttggctttgaggcgctcctgcgatggcggcatccacaa
cgcggcattgtgacccctgcggagttcatcgccatcgccgaggagacgggactgatcgtg
cccatcggtcagatggtgctgcgtgaagcatgtcgtcaactgagtgcgtggaagcagcgg
catcctgaacgaacactggcgatgaacatcaacctgtcgccccgtcagattgccgatcct
gatctggttcatcgtaccgcagcgctgatcgatgagtatcgcctcgatgcggatgcgctg
cgcctcgaaattaccgagacggcgatcatcgaacatggggatgccgccggtcgggtgttg
cagcagctgcgtgcgctgggggtgcagatctgcatcgatgactttggcaccggctattcg
tcgctcagttatcttcaccgcttcccgattgcaacaatcaaaatagatcgttccttcgtc
agtcagattcatcgcagccacgagaacaccgaaattgtccgctccatcatctcgctggcg
cgctcgctgggaatggcggtcatcgccgagggaaccgaaaccgaggagcagttgctccgc
ctccgctcgatgtcgtgtgcgtatgggcagggatggctgttcgcacacgcgctcgaaccg
gcggaagcgaccgcaatgctcgatcgcgagacagagtaa
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