Roseiflexus sp. RS-1: RoseRS_3894
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Entry
RoseRS_3894 CDS
T00542
Name
(GenBank) (Uracil-5)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrs03016
]
RoseRS_3894
Enzymes [BR:
rrs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
RoseRS_3894
Transfer RNA biogenesis [BR:
rrs03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
RoseRS_3894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
BpsA_C
Methyltransf_31
Methyltransf_25
UPF0020
Methyltransf_15
Methyltr_RsmB-F
Methyltransf_11
Methyltransf_12
Methyltransf_24
DUF3305
Motif
Other DBs
NCBI-ProteinID:
ABQ92247
UniProt:
A5V044
LinkDB
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Position
complement(4874821..4876044)
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AA seq
407 aa
AA seq
DB search
MSISNKLFRRQMIEAVRSGAPVLPRCLHAPPTGQCGGCAFQDREYPVQVAAKRTALRHLW
EGDLPETLLTTLDVVASPNPFAYRTRMDFVASKERFGLRRSGRFNYIIDLKECHLIPARA
FAAARAMYDHAMRLGLPDYDLRAHAGFLRYVAVRRSPDDEVLLALITAAPDEAGTYAGKV
EQVAQAALEYDGVVGVHWLINPTRTDISFGETARFWGRATLPMRVGAHTLDIGPNTFFQN
NVWLLMPLLEAVRDAVAGEGERARALADLYGGVGTIALFVADLADQIVCVESVEESVRLA
RENIARAGFEHIAIVKADVADALRERTRGAFDIVIADPPRTGLGPDVCRELLRLRPQRIV
YISCNPLTQRDDVRMLTEAYRLTSLRGYDMFPHTPHLESLAVLDVIR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcgaacaaactttttcggcgacagatgattgaagcggtacggtcgggagcg
ccagttttgccgcgttgcttgcacgccccgccgaccggtcagtgtggcggatgcgcattc
caggatcgtgagtatccggtgcaggtggcagcaaagcgcacggcgcttcgtcatctctgg
gaaggcgatctaccggaaacgctcctcaccacgcttgatgtcgtcgcttcgcccaatccc
ttcgcttatcgcacgcgcatggactttgtggcgagcaaggaacgttttggtctgcgacgc
agcggcaggttcaactatattatcgacctgaaggaatgccatctcataccggcgcgcgca
ttcgctgccgcgcgcgcaatgtacgatcacgcgatgcgtctgggtttgcccgactacgac
ctgcgcgcgcatgccggttttctgcggtacgtggcagtgcggcgcagccctgacgacgaa
gtgctgctggcgctgatcactgccgctcccgacgaggcggggacgtatgccgggaaggtg
gaacaggtggcgcaggcggcgctcgagtacgatggcgtggtcggcgttcactggttgatc
aaccccacccgtactgatatatcgtttggggaaacggcgcgtttctgggggcgcgcaacg
ttgccgatgcgtgtgggggcgcatacgctcgacatcggaccgaacaccttctttcagaat
aatgtctggttgcttatgcccctgctcgaggcggtgcgtgatgcggttgccggggaaggc
gaacgtgcgcgtgcgcttgccgatctgtatggcggggttggcacaatagcgctgtttgtc
gccgatcttgccgatcagattgtctgtgtcgaatcggttgaggaaagtgtgcgtctggcg
cgagaaaacattgcgcgcgccggctttgagcatatcgccattgttaaggcggatgtcgcc
gatgcgctccgcgaacgaacacggggcgcgttcgatatcgttatcgccgatccgccgcgc
accggtttgggtcccgacgtatgccgcgaattgctgcggctgcgcccgcaacgcattgtg
tatatctcgtgcaacccgctcacccagcgcgacgatgtgcgtatgctgacggaggcgtat
cgcctgacatcgctgcgagggtacgatatgtttccccatacgccgcatctcgagtcgctg
gcagtactggacgttatccgctga
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