Roseiflexus sp. RS-1: RoseRS_3960
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Entry
RoseRS_3960 CDS
T00542
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrs03000
]
RoseRS_3960
Transcription factors [BR:
rrs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RoseRS_3960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABQ92310
UniProt:
A5V0A7
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Position
4959173..4960135
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AA seq
320 aa
AA seq
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MLTLQKLELFVYVAQAGSISKAADHFLMSQPNVSQHIQDLEAGFGEQLLIRKHRGVTLTP
AGETLLQYAQEIFRLVAEAKLAITNVSQLSSGSLALAATPGVGIYVLPECVEQFRVRYPQ
FTVSIKTGTTAEVINLLTESQCEASFIEGELDGIRLPSRFGALVLDTVQQYIVVGQAHPW
WTVSSLSIQALHDQPVILRQIGSQSRAWLDKLLKERHIRLRYVGEFDNPETIKRALLAGS
AFAILPAYVVRHEVDLGVLRLLPLTDCELQRQLKLIWNKEWPLSPITYAFLQHLTDQYPA
IHAALTISRRHLRANRTLGR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttgacattgcagaaactcgaactctttgtctatgtggcacaggcagggagcatcagt
aaggcagccgaccatttcctgatgtcacagccgaacgtgagccagcatattcaggatctg
gaagccggatttggcgaacaattgctgatccgaaagcatcggggagttacgctcactccc
gccggagaaacgctcctccagtatgcgcaggagatcttcaggttagtggcagaggcgaaa
ctggcgatcaccaatgtgtcacaattgagcagcggcagtctggcgctggcggcaacgcct
ggcgttggcatttatgtgctgccggagtgtgtggaacagttccgcgtccgttatcctcag
tttacggtgtcgatcaagacgggtacgactgctgaggtgatcaatctcctgaccgaaagc
cagtgcgaggcgagttttatcgaaggcgaactggacggcattcgtctgccgtcgcgcttc
ggggcgctggtgctggatacagtgcagcagtacattgtcgtcggtcaggcgcacccgtgg
tggacggtctcatcgctgagcattcaggcgctccatgatcagccggtgatcctgcggcag
atcggcagccagagtcgggcgtggctcgataaactgctgaaggagcgccatattcgcctg
cgatacgtgggtgagttcgacaatccggagacgatcaaacgcgcgctccttgcgggaagc
gcatttgccatcctgcccgcctatgtggtgcgtcacgaagtagacctgggggtgctgcgt
ctgttgccgctgaccgattgcgagttgcagcgtcagttgaaactgatctggaacaaagag
tggcccctctcaccgatcacctacgcctttttgcagcacctgaccgatcagtatcctgca
attcacgctgcgctcaccatctccaggcgtcatttgagggcgaatagaacacttgggcga
tag
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integrated database retrieval system
