Roseiflexus sp. RS-1: RoseRS_4008
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Entry
RoseRS_4008 CDS
T00542
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
rrs
Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrs03032
]
RoseRS_4008
03036 Chromosome and associated proteins [BR:
rrs03036
]
RoseRS_4008
03400 DNA repair and recombination proteins [BR:
rrs03400
]
RoseRS_4008
DNA replication proteins [BR:
rrs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RoseRS_4008
Chromosome and associated proteins [BR:
rrs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RoseRS_4008
DNA repair and recombination proteins [BR:
rrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RoseRS_4008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SIS_2
VWA_3
DUF2267
Ribosomal_L12
DUF937
Motif
Other DBs
NCBI-ProteinID:
ABQ92353
UniProt:
A5V0F0
LinkDB
All DBs
Position
5015093..5015371
Genome browser
AA seq
92 aa
AA seq
DB search
MQKTDFIKAVAERANRSQKETKEIVDAALEVITEALKRGEKVTLTGFGTFEVRQRQAREG
VNPQTRSKIQIPATKTPGFSASSTLKNAVKDS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagactgacttcatcaaagcggtcgccgagcgggcgaaccggtcgcagaaggaa
accaaggagatcgtcgatgcggcgctggaagtcatcaccgaagcgctgaagcgcggcgag
aaagtcaccctgaccggcttcggcacattcgaagtgcggcagcgtcaggcgcgcgaaggg
gtgaacccgcagacccgctcaaaaatccagatcccggcgaccaaaacccctggcttcagc
gccagcagcacgttgaagaacgcggtgaaggatagttga
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