Roseiflexus sp. RS-1: RoseRS_4025
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Entry
RoseRS_4025 CDS
T00542
Name
(GenBank) NB-ARC domain protein
Organism
rrs
Roseiflexus sp. RS-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
NB-ARC
APAF-1-like_WHD
Cytochrom_D1
APAF1_C
AAA_16
EAD10
Motif
Other DBs
NCBI-ProteinID:
ABQ92370
UniProt:
A5V0G7
LinkDB
All DBs
Position
5037105..5041676
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AA seq
1523 aa
AA seq
DB search
MLLEPLFAAIAEAVFVYLLQESTLTERIRATLGLDPTRRAFQTALARAYTVFARHYPEWT
TTLFDQPFLTSPTVVPLLAELLTRRGQPDPAHLARLFAAHLGHPDPDRWERLGDATRAAA
DFLTWLEGELARQDALQPLFDSRALERIAEHTGAIRRALEALAHNRQTAADLDLLRQALR
DGQVALATGERAVALGSSADSVVIVTGDGNIVQVLNVQQRTDLERLLTTRRYNLPSLPEH
YVLREADLERLRQALLNNGAVALGIVGVKGMGGIGKSVLAAALARDLAVQAAFPDGIVWL
PIGREPNLPARQEELYLFLTGQRENFRDAIQGRSFLSVALEGKTCLVILDDVWDSSHAEA
FPVVTGSATRYLITTRNAEVLQTLNAPPVSLDVLSPDQALSLLADWTGQPVANLPSIACE
VARECGYLPLALAMVGAFVRQNPESWERALHRLQTADLAKLRRLFPGYEHPTLLAALEVS
VEAMAATDRARYLDLAVFPEEAAIPLPVLHAFWQPLGLDEDDVADLAETFVNRSLARRDE
DGRLRLHDLQHDYLRACAGANLPVLHRRFLLACARSFLGASGETLEGLPWHRLPSQPNYL
WDRLVYHHLQAGAWDAIYALLTDFDFLEARCRATTVFELEADYRLALNAWPQEDTARREV
LSAFEERLRLEASRIAQAPEWFFPALYNHLRWLDAPDGGPLHRLCETAAFHRTNYLRSRL
DPRPEPPLWLRSLEGHTHWVLAVAVSPDGRTIVSGSHDRTVKVWEAESGRLLRSLEGHTG
SVRAVAVSPDGRTIVSGSHDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGS
HDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDRTVKVWDAASGRLLRS
LKGHTGSVLAVAVSPDGRTIVSGSHDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGR
TIVSGSWDNTVKVWEAESGRPLRSLEGHTGSVRAVAVSPDGRTIVSGSDDRTVKVWEAES
GRLLRSLEGHTDWVLAVAVSPDGRTIVSGSRDRTVKVWEAESGRLLRSLEGHTGSVLAVA
VSPDGRTIVSGSHDRTVKVWEAESGRLLRSLEGHTDWVRAVAVSPDGRTIVSGSWDNTVK
VWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDRTVKVWDAASGRLLRSLEGHTD
WVLAVAVSPDGRTIVSGSHDRTVKVWEAESGRLLRSLEGHTGGVNAVAVSPDGRTIVSGS
DDRTVKVWEAESGRLLRSLEGHTGSVLAVAVSPDGRTIVSGSDDRTVKVWEAESGRLLRS
LEGHTGSVLAVAVSPDGRTIVSGSDDRTVKVWEAESGRLLRSLEGHTDWVRAVAVSPDGR
TIVSGSWDNTVKVWEAESGRLLRSLKGHTGSVRAVAVSPDGRTIVSGSWDNTVKVWEAES
GRLLRSLEGHTGGVNAVAVSPDGRTIVSGSWDHTIRAWNLESGESCVLFWNDAAIRSLAL
SGDGQLLVCGDVSGRVWLFDVVG
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaaccgctcttcgccgctatcgccgaagccgtctttgtctacctgctccag
gagagcaccctgacagagcgcatccgcgccacccttggtcttgacccaacgcgccgcgcc
ttccagaccgcgctggcacgggcatacactgtcttcgcccgccactacccggaatggacg
acaaccctcttcgatcaaccgtttctcaccagtccaaccgtcgttccgctgctggctgaa
ctgctcacccgccgcggtcaaccggacccggcgcacctggcgcgtctgttcgccgcacac
ctcgggcatcccgaccccgaccgctgggaacggctgggtgatgccacccgcgccgccgcc
gactttttgacctggctggagggcgaactggcacgccaggacgctctgcaacccctcttc
gacagccgtgcgctggagcgcattgccgaacacaccggggccattcgccgggcgctagaa
gcgctggcgcacaaccggcaaacggcagccgacctcgatctcctgcggcaggcgctgcgc
gatggtcaggtcgctctggcgaccggcgagcgcgccgtggctctcggtagcagcgccgac
agcgtggtcatcgttactggcgacggcaatatcgttcaggtgctgaatgtccaacagcgc
accgacctggagcgcctgctgaccacccgccgttataacctcccctcgctgccggagcac
tatgtcctgcgtgaagcagacctggaacggctgcggcaggcgctgctgaacaatggcgcc
gttgccctgggcattgtcggcgtgaagggcatgggtggcattggcaagtcggtgctggct
gctgccctggcccgtgatcttgccgtgcaggccgcctttcccgatggcatcgtctggctg
cccatcggtcgcgagccaaacctgcccgcccgccaggaagaactctacctctttctgacc
ggtcagcgcgagaactttcgcgacgcgatccagggccgcagcttcttgagcgttgcactg
gagggcaagacctgcctggtgatcctggacgacgtctgggactccagccacgccgaagcc
tttcccgtggtgaccggttcggcgacccgttacctgatcaccacccgtaacgccgaggtc
ttgcagacgctcaacgcgccccccgtttcgctggacgtactcagcccggatcaggcattg
agtctgctggccgattggaccgggcaacccgttgcgaatctgccatcgatagcctgcgag
gtagcgcgggagtgtggctacctgccgctggcgctggcgatggtaggcgccttcgttcgc
cagaaccccgaaagctgggagcgggcgctgcaccgcctgcagaccgctgacctggcgaaa
ctccgtcgcctcttccccggctacgagcaccccaccctgctggcggcgctcgaggtgagc
gtcgaggcgatggcagcgaccgaccgcgcccgctacctggacctggccgtcttccctgaa
gaggccgcgattccgcttcccgtcctgcacgccttctggcagccgctggggctggacgaa
gatgacgtagccgacctggcggagacctttgtgaaccgttcgctggcgcgtcgggacgag
gatggacgcctgcgcctgcacgacctgcagcacgactacctgcgcgcctgcgcgggagcg
aacctgcccgtcctgcaccgtcgcttcctgctcgcctgcgcccggagtttcctgggcgcc
tccggtgaaacgctggaagggctgccctggcatcggctgccatcgcaacccaactacctg
tgggatcggctggtctatcatcacctacaggctggcgcctgggacgccatctatgccctg
ctgaccgatttcgacttcctggaagcgcgctgccgggcgacgaccgtcttcgagctggaa
gccgattaccgactggcgctgaacgcctggccgcaggaagataccgcacggcgcgaggtg
ctgtccgctttcgaggagcgcctgcgcctggaagcctcgcgcattgcccaggcgcccgaa
tggttcttccccgctctctacaaccatctgcgctggctagatgcaccggatggtggtccc
ctgcatcggctgtgcgaaaccgctgcattccaccgcacgaattacctgcgctcccgcctc
gacccgcggcccgaaccgccgctctggctgcgctccctggaaggccatacgcattgggtg
ctggccgtggcggtcagccccgacgggcgcaccatcgtcagcggctctcatgaccgcacg
gtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctccctggaaggccatacgggt
tcggtgcgggccgtggcggtcagccccgacgggcgcaccatcgtcagcggctctcatgac
cgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctccctggaaggccat
acgggttcggtgcgggccgtggcggtcagccccgacgggcgcaccatcgtcagcggctct
catgaccgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctccctggaa
ggccatacgggttcggtgcgggccgtggcggtcagccccgacgggcgcaccatcgtcagc
ggctctcatgaccgcacggtgaaggtgtgggacgccgcaagcgggcgcctgctgcgctcc
ctgaaaggccatacgggttcggtgctggccgtggcggtcagccccgacgggcgcaccatc
gtcagcggctctcatgaccgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctg
cgctccctggaaggccatacgggttcggtgcgggccgtggcggtcagccccgacgggcgc
accatcgtcagcgggtcgtgggataacacggtgaaggtgtgggaggcggaaagcgggcgc
ccgctgcgctccctggaaggccatacgggttcggtgcgggccgtggcggtcagccccgac
gggcgcaccatcgtcagcggctcggatgaccgcacggtgaaggtgtgggaggcggaaagc
gggcgcctgctgcgctccctggaaggccatacggattgggtgctggccgtggcggtcagc
cccgacgggcgcaccatcgtcagcgggtcgcgtgaccgcacggtgaaggtgtgggaggcg
gaaagcgggcgcctgctgcgctccctggaaggccatacgggttcggtgctggccgtggcg
gtcagccccgacgggcgcaccatcgtcagcggctctcatgaccgcacggtgaaggtgtgg
gaggcggaaagcgggcgcctgctgcgctccctggaaggccatacggattgggtgcgggcc
gtggcggtcagccccgacgggcgcaccatcgtcagcgggtcgtgggataacacggtgaag
gtgtgggaggcggaaagcgggcgcctgctgcgctccctggaaggccatacgggttcggtg
cgggccgtggcggtcagccccgacgggcgcaccatcgtcagcggctctcatgaccgcacg
gtgaaggtgtgggacgccgcaagcgggcgcctgctgcgctccctggaaggccatacggat
tgggtgctggccgtggcggtcagccccgacgggcgcaccatcgtcagcggctctcatgac
cgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctccctggaaggacat
acgggcggagtgaacgcggtggcggtcagccccgacgggcgcaccatcgtcagcggctcg
gatgaccgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctccctggaa
ggccatacgggttcggtgctggccgtggcggtcagccccgacgggcgcaccatcgtcagc
ggctcggatgaccgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctgcgctcc
ctggaaggccatacgggttcggtgctggccgtggcggtcagccccgacgggcgcaccatc
gtcagcggctcggatgaccgcacggtgaaggtgtgggaggcggaaagcgggcgcctgctg
cgctccctggaaggccatacggattgggtgcgggccgtggcggtcagccccgacgggcgc
accatcgtcagcgggtcgtgggataacacggtgaaggtgtgggaggcggaaagcgggcgc
ctgctgcgctccctgaaaggccatacgggttcggtgcgggccgtggcggtcagccccgac
gggcgcaccatcgtcagcgggtcgtgggataacacggtgaaggtgtgggaggcggaaagc
gggcgcctgctgcgctccctggaaggacatacgggcggagtgaacgcggtggcggtcagc
cccgacgggcgcaccatcgtcagcgggtcgtgggaccacacgatcagggcctggaatctg
gaaagcggcgagtcgtgcgtactcttctggaacgacgctgccatccgcagcctggccctt
tccggcgatggtcaactgctggtatgcggtgatgtgtctgggcgggtgtggctgtttgat
gtggtggggtag
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