Roseiflexus sp. RS-1: RoseRS_4122
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Entry
RoseRS_4122 CDS
T00542
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00230
Purine metabolism
rrs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RoseRS_4122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrs03009
]
RoseRS_4122
Enzymes [BR:
rrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
RoseRS_4122
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
RoseRS_4122
Ribosome biogenesis [BR:
rrs03009
]
Prokaryotic type
Other maturation factors
RoseRS_4122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ACT_AHAS_ss
Motif
Other DBs
NCBI-ProteinID:
ABQ92466
UniProt:
A5V0R3
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All DBs
Position
5163567..5165891
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AA seq
774 aa
AA seq
DB search
MDSPATLAVSSGDVATDSSVRSTRRTSAAPQPPLRPNPEFTHSPVADELVARLKLYQRQP
NGSTDRMARSEELVRNAYAVACEAHGKQKRDSGEPYIDHPVAVAHILIDLQLDAASVAAA
LLHDVLEDTLVSKEQLTALFGAEIANLVDSVTKLSALEARTREEAQVGTYRKMFIAMADD
PRVVLVKLADRLHNMRTIGSLSEERQKRMALETLEIYAPLAHRLGIWQIKWELEDRAFAV
LNPEKYQEISRQLSLRRDARERLVHRVIQRLRQVLEKEGIKADITGRPKHIYSIYRKMER
KGVSLDQIYDQLAVRVIVDTVADCYRVLGLVHATWPPVPGEFDDYIAMPKESMYQSLHTT
VLIPGGQPCEIQIRTHEMHEVAERGIAAHWRYKEGFGRIDASFESKLAWLRGLIEWRRDL
TDAREFVDSFKTDVLEEQVYVFTPKGKIIDLPVGATPVDFAYRIHSDVGHSCVGAKVNNR
IVPLDYQLRNGEIVHIMTSKTPRGPSRDWLNFVKTSGARNHIRRYFKRLDRTENIAAGRE
LLEKELKRLGLSVPFEEIVAITGLKSIDDVFAQIGSGDITARQVAQKILSHRTPVGADDL
ADIPQVAPTTERPNDTSIIRVRGIENTQVPTRLARCCNPVAGEPIVGFVTRGKGITVHRA
DCRTILNERDRARLVEVTWGAGVPKQGYPVPVRIEAWDRVGLWRDVSGVIADAGINIDAV
EQVPTRRPGRAVLTVTLRIQSIAQLTAILDKLNRLSDVIEARREQNAAPTAETP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggactcaccagcaacactcgcggtgagcagtggcgatgtcgccaccgactcctctgtt
cgttcaacgcgccgtactagtgccgcgccgcagccgccgctgcgtccaaatcccgagttt
acccatagcccggtcgccgatgagctggttgcgcgtctgaaactctaccagcgccagccg
aacggcagtaccgatcggatggcacgcagcgaggaactggtgcgcaatgcgtatgccgtc
gcctgtgaagcgcacggcaaacagaagcgcgactcgggtgagccgtatatcgatcatccg
gttgccgttgcgcatattctgatcgacctgcagctcgatgcagcgtcagttgctgccgca
ctgctccacgatgtcctggaagataccctcgtctccaaagaacaactgacagcgttgttc
ggcgccgagatcgccaatctcgtcgatagcgtcaccaaactttcggcgctggaagcgcgc
acccgcgaagaagcgcaggtcggcacgtatcgcaaaatgttcattgcaatggcggacgat
ccgcgtgtggtgctggtcaaactggcagaccgcctgcacaacatgcgcactatcggctcg
ctctccgaagagcgccagaaacgcatggcgctcgagacgctcgaaatctacgccccgctg
gcgcatcgcctcggcatctggcagatcaagtgggaactcgaagaccgcgcctttgccgtc
ctcaaccctgaaaaatatcaggagatcagtcgtcagctgtcattgcggcgcgatgcgcgc
gagcgcctcgtccaccgcgtgatccagcgtctgcgccaggtgctcgaaaaagaagggatc
aaagcggatattacggggcgacccaagcacatctattcgatctatcgcaagatggaacgc
aagggcgtcagcctcgaccagatctacgaccagctcgcggtgcgcgtgattgtcgatacg
gttgccgactgttaccgcgtgctcggtctggtgcatgcaacctggccccccgtgcccggc
gagttcgacgattatatcgccatgccgaaggaaagcatgtaccagtcactgcacacaacc
gtgctgatacctggtggtcaaccctgcgagatccagatccgcacccacgagatgcacgaa
gtcgctgaacgcggtattgcggcgcactggcgctacaaagaagggtttggacgcatcgac
gcatcgttcgagagcaaactggcatggttgcgcggcttgatcgaatggcggcgcgatctc
accgatgcccgcgagttcgtcgattcgttcaagaccgatgtgctcgaagagcaggtgtat
gtgttcactcccaagggcaaaatcatcgacctgccggttggagcgacgccggttgacttc
gcctaccgcattcactccgatgtcgggcacagttgcgtcggcgcaaaggtgaacaaccgg
attgttccgctcgattaccagttgcgcaacggcgaaatcgtccatattatgacctcgaag
acgccgcgcggtccgagccgcgactggctcaacttcgtcaagacgagcggcgcgcgcaac
catattcgccgctacttcaagcgtctcgaccgtaccgaaaatatcgctgccgggcgcgaa
ttgctggaaaaagaactcaaacgcctcggtctgtcggtgcccttcgaggagattgtcgcc
atcaccggtctcaagtcgatcgatgatgtgttcgcccaaatcggcagcggcgatatcaca
gcgcgtcaggttgcgcaaaagattctcagccaccgcacaccggtcggtgcagacgacctg
gcagacatcccgcaggtcgctccgacaactgaacgccccaacgataccagcatcatccgt
gtacgcggcatcgaaaacacgcaggtgccgacccgcctggcgcgctgttgcaatccggtg
gcgggcgaaccgattgtcggctttgtgactcgtggcaagggaattacggtgcatcgcgcc
gactgccgcaccatcctgaacgaacgcgaccgcgcgcgcctggtggaggtgacctggggc
gccggcgtaccaaagcagggatacccggtgccggtacggatcgaagcctgggatcgcgtt
gggctgtggcgtgatgtctcaggcgttatcgccgatgcgggcattaacatcgacgcggtc
gagcaggtgccaacccgccgccccggtcgcgcggtgctgaccgtcaccctccgcatccag
agcattgcgcagctgaccgccatcctcgacaaactcaaccgtctctccgatgtgatcgaa
gcgcgtcgtgagcaaaatgccgccccgactgctgaaacgccctga
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