Roseiflexus sp. RS-1: RoseRS_4244
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Entry
RoseRS_4244 CDS
T00542
Name
(GenBank) conserved repeat domain
Organism
rrs
Roseiflexus sp. RS-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
CARDB
Integrin_A_Ig_3
Motif
Other DBs
NCBI-ProteinID:
ABQ92587
UniProt:
A5V134
LinkDB
All DBs
Position
5322076..5326074
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AA seq
1332 aa
AA seq
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MRRGMVWLWLSGLIGGLIMFIPTTGQTPVARATVPNNQNWIFTPGTCDPAFQGAVFANWN
PATGAPNCGVFTSGAPSVNQFDTGQVFPPNVLRDEASVTAPCENGRISGLCYRMWYVGTR
PGEPYRRIGYAVSPDGVSWYRVQGTHTGGSVFEGSGTSGHSFDQNGVTTFHVIKDGGQYH
MWYTGVSSDWRWVGFGYATSTNGITWVRQNGGAPVLTSRPGSGLFDDDRIIGPFVLIDEA
SAIAPCEGGRTSGRCFRMWYEGFRANNTFYVGHALSSDGISWSIVNGPAPLGSVLAGDPN
GPLGFAAFDSNNVGLTAVIKDGAIYRMWYQAKSYQNPPEHPFGDWFTIGHVTSVDGVNWV
RPNPNLLAFSGDMDTISVNPPGTNDDVWVVRLLKEDLTYRMWYATAGTPNSTRFGLAEMT
QGSPITPTVLRNGDEFTITMTTQQTIPPDGSVLITLPPDVALDQFAAVELQGFEPGASLL
RERAAVTDAYSGFAARDAILIRLPNGAVLGPKTIRFNLGAGAPNPSTFLIQTFDTHKVLE
RARVVPGDLRVTQSVASVVAGEPAVYTVTVSNVGPNAVTGAVLNSTFPAQLSGTTWTCVP
SGGASCAPTSGSGNWINKTLNLPVGSSVTFTVTGDLVSTATGNLVSTVGVATPDGINELT
PTDNTSTLSTPISVRGDLAITRMSNPAVPQAGQPITYTLTVTNAGPSTVVGATVVNIFPI
SVTNVIWNCGATSGSACPSSGSGSINAPVTLAPGGNAVFTATGVVSPAALTMPPHSAIVT
VPGNVTDPDPDNNVFTDGGGLGRPADLTISKTVAPAVVVPGLPVTYTITVTNTGSADADG
ATVLDLFPPTISGVAWTCSGANGATCAQSSGSDNLTLSLPSFPVGGAATITITGVVAADA
TGNLVNTAQVLPPVGVDDPTFANNTSTLSTPISVRGDLAITRTSNPAVPQAGQPITYTLT
VTNAGPSTVVGATVVNIFPISVTNVIWNCGATSGSACPSSGSGSINAPVTLAPGGNAVFT
ATGVVSPAALTMPPHSAIVTVPGNVTDPDPDNNVFTDGGGLGRPADLTISKTVAPAVVVP
GLPVTYTIMVTNTGSANADGATVLDLFPPTISGVVWTCSGANGATCAQSSGSGNLTLSLP
SFPVGGAATITIAGVVAADATGNLVNTAQVLPPVGVDDPTFANNSVTISSTLQPHTDLVV
TQSLPVHAFVGQTIVYTVTVQNNGPSVAASARVSNTPPALVTVTGWACAASSGSSCGAAS
GSAPVDDMVTLAPGGTVTYTVTGVVFRRAVGALPFSSTVAAPTGAEDPVPSNNRAEGSTQ
ALYVVNLPVIAR
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcggtatggtctggctctggctatccggtctgatcggcggtctgataatgttc
attcccacaacagggcaaacgccggttgcgcgtgcaacggttccaaacaatcaaaactgg
atattcacgccaggaacgtgtgatccggcgttccagggcgccgtgtttgcgaactggaat
ccggcgaccggagcgcccaactgcggcgttttcacctctggggcgccatcagtgaatcag
ttcgataccggtcaggtcttcccgcccaacgttctcagagatgaagcgagtgtcaccgca
ccatgcgaaaacggtcgcataagcggtctgtgttatcggatgtggtacgtcggcacgcgt
cccggcgagccgtatcgccggatcgggtatgccgtctcaccggacggcgtttcctggtat
cgcgttcaggggacgcataccggcggcagcgtcttcgaagggtctggaacgtctggacat
tcttttgatcagaacggcgtgacaacatttcatgtgatcaaggacggcggacagtatcac
atgtggtacaccggcgtcagtagcgactggcgctgggtagggttcggttacgcaacttcg
accaacggcattacctgggtccgacagaacggcggagcgccggtcctgacgtcgcgtcct
ggttcgggtttgttcgacgatgatcgcattatcggaccgtttgtgctgattgatgaagcc
agcgctatcgcaccgtgcgaaggcgggcgcaccagcgggcgttgcttccgcatgtggtat
gaagggttccgtgcgaataacaccttctatgtaggacacgcgctttcttccgatgggata
tcctggtcaatcgtcaacggaccggcgcctctcggatcagtgctggctggagatccgaat
ggtccgctcggctttgctgcgtttgactcaaacaatgtcggtttgacggcagtcatcaag
gatggcgctatctatcggatgtggtaccaggccaaaagctaccagaatccaccagagcac
ccctttggcgattggttcaccatcggacatgtcacctcagtggatggagtgaactgggtg
cgccccaatcctaatctgcttgcgttcagcggtgatatggacacgatcagtgtcaatccc
cctggaaccaacgacgatgtgtgggtcgtgcggctgttgaaggaagacctgacctatcgg
atgtggtatgccaccgccggaacgccgaacagtacgcgcttcggtctggctgagatgacg
cagggatcgccgatcacgccaaccgtgctgcgcaacggtgatgagtttacgatcaccatg
accacgcaacaaacaatcccgcccgatggcagtgtcttgatcaccctgccgccagacgtt
gcgctcgatcagtttgctgcggtcgaactgcaaggttttgaacccggcgcttcgctcctc
cgtgaacgcgcggcggtcaccgatgcgtacagcgggttcgccgcgcgggatgcgatcctg
atccggttgccgaacggcgccgtcctcggaccgaaaacaatccggtttaatctcggcgct
ggcgcacccaacccgtccaccttcctgatccagacattcgacacccacaaggtgctcgaa
cgcgcgcgcgtcgttcccggcgatctccgggtgacccagagtgtggcttcggtcgttgct
ggcgaaccggcagtgtacaccgttacggtcagcaacgtgggtccgaatgcggtcaccggg
gcggtgctgaacagcacattcccggcgcaactgagcggcacgacctggacgtgtgttccg
tcgggcggggcttcctgcgcgccaaccagcggcagtggcaactggatcaacaagaccctc
aatctgccggttgggagcagcgtcacatttaccgtcaccggtgatctggtaagcacggca
accggcaatctggtcagtaccgtcggtgtggcgactcctgacggcatcaatgaactgacg
ccgaccgataatacgtccacactctcgacgccgatcagtgttcgcggcgacctggcaata
acgcgaatgagcaacccggccgttccgcaggcaggtcagccgatcacctacacgctgacg
gtaacgaacgccggaccgagcaccgtggtcggtgcgaccgtggtgaacatcttcccgatc
agcgtcacgaatgtcatctggaattgcggcgcgacgtccggctcggcgtgcccctcgtca
ggaagcggaagcatcaatgcgccggtcacgcttgcgccgggcgggaatgcggttttcacc
gccaccggcgtggtgtcgccagcggcgctgacgatgccgccgcattcggctatcgtgaca
gtgccggggaatgtgaccgatcctgatccggacaacaacgtgttcaccgacggtggcggc
ctggggcgacctgccgatctgacgatcagcaagacggtggcgccagcggttgtggttccc
ggactgccggtgacctatacgattacggtgacgaacaccggcagcgcagatgccgatggc
gcgaccgtgctcgacctgttcccgccgacgatcagcggagtggcgtggacatgcagcggc
gcgaatggcgcaacatgcgcgcagtcaagcggcagcgacaacctgacgctgagcctgccg
tcgttcccggtcggcggagcggcgacgatcaccataacaggcgtcgtggcggcagacgca
accggcaacctggtgaatacggcgcaggtcttgccgccggtcggcgtggacgacccgacg
ttcgccaataatacgtccacactctcgacgccgatcagtgtccgcggcgacctggcaata
acacgaacgagcaacccggcggttccgcaggcaggtcagccaatcacctatacgctgacg
gtaacgaatgccggaccgagcaccgtggtcggtgcgacggtggtgaacatctttccgatc
agcgtcacgaatgtcatctggaattgcggcgcgacgtccgggtcggcatgcccctcgtcg
ggaagcggaagcatcaatgcgccggtcacgcttgcgccgggcgggaatgcggttttcacc
gccaccggcgtggtgtcgccagcagcgctgacgatgccgccgcattcggcaatcgtgaca
gtgccggggaatgtgaccgatcctgatccggacaacaacgtgttcaccgacggtggcggc
ctggggcgacctgccgatctgacgatcagcaagacggtggcgccagcggttgtggttcct
ggtctgccggtgacctatacgattatggtgacgaacaccggcagcgcaaatgctgatggc
gcaaccgtgctcgacctgttcccgccgacgatcagcggggtggtgtggacatgcagcggc
gcgaatggcgcaacatgcgcgcagtcaagcggcagcggcaacctgacgctgagcctgccg
tcgttcccggtcggcggagcggcgacgatcaccatagcaggcgtcgtggcggcagacgca
accggcaacctggtgaatacggcgcaggtcttgccgccggtcggcgtggacgacccgacg
ttcgccaacaacagcgtcacgatttcgagtacgcttcaaccgcacaccgatctggtggtg
acacagagtctccctgtgcacgcatttgtaggacaaaccatagtgtacacggtcacggta
caaaacaacggtccgagtgttgctgccagcgcgcgggtgagcaacacgccaccggcgctc
gtgacggtgaccggttgggcgtgtgcagcgtcgagcgggtcgtcctgcggtgcagcaagc
ggcagcgcacccgtcgatgatatggtgacgctggcgccgggcggaaccgtgacctacaca
gtgaccggggttgtcttccggcgggcagtaggggcgttgcccttctccagtacggttgcc
gcaccgacaggcgcggaagaccccgtgccatcgaacaaccgggcggagggttcaacacag
gcgttgtatgtggtgaacctgccggtcattgcgcgatga
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