KEGG   Roseiflexus sp. RS-1: RoseRS_4333
Entry
RoseRS_4333       CDS       T00542                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
rrs  Roseiflexus sp. RS-1
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rrs02048]
    RoseRS_4333
Prokaryotic defense system [BR:rrs02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    RoseRS_4333
SSDB
Motif
Pfam: Cas_Csd1 FimW_N Glyco_transf_29
Other DBs
NCBI-ProteinID: ABQ92671
LinkDB
Position
complement(5445473..5447413)
AA seq 646 aa
MNWMQSLYETYEQCAKGGLVGYVSGTKRPLLPICHITIQAHIEVVIDGCGNFRRAQLVSK
DDAVTIIPATESSASRSGSKPECHPLCDKLQYLAGDFVKYGGKVTSGFQRNPAEPHQNFV
TLLSGWNSKCLHPKVSAILKYIQKGTLMADLVKEGVLLIDHRRLLAKDDIEPEKRRGTIF
DVLNDQGDAVVRWVVEIPGDTESRVWRDTKVWDSWIDYYLNHRSGTSEICFVIGEERTLT
NNHPKYIRREGDNAKLISSNDTQGFTFRGRFITDEQACSVSLEASHKAHYALMWLIDRQG
YRDGDLAIVAWAISGATVTVPQPTDDPIATLFGDLPSDDKSIDTAQDVAIRLKKKIAGYR
QEIGDRTDVVVMGVDSATPGRLAVIYYRTLKGSDFLDRIETWHDTCAWRHTYRVIEERDT
NGKLYRRRIPFIGAPAPADIAEAAYGRRLDDRLKQATIKRLLPCIVDGQPLPRDLVESAI
RRASNPVVLSDDQKEKVLTIACALYRKYMYGKEQYDMALDETRRTRDYLYGRLLAIADVI
EERALYKAEQNRPTNAIRYMQQFSQRPFRTWKQIHDLLMPYLMRLGGRAYYYKNLIAEVE
SMFTPEDFVSTRSLSGEYLLGFYCQRQKLLEKRADDREDDNDGTSI
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgaactggatgcagagcctgtatgagacgtatgaacagtgtgccaagggaggactcgtc
ggctacgtttccggtacgaagcgaccgttgctaccgatctgtcatatcaccatccaggcg
catatcgaggtcgtcattgacggctgtggtaactttcgtcgcgcccagttggtttcaaaa
gacgatgcggtgacgatcatacctgcaacagaatcatccgccagtcgcagcggtagcaaa
ccagaatgccatccactctgcgataaattgcagtacctggcgggagattttgtcaagtac
ggcggtaaggtgacttctggttttcagcgcaatcccgcggagccgcatcaaaacttcgtc
acgttgctgtcgggctggaactccaaatgcctacatccgaaggtttcggcaatactcaag
tacatccaaaaggggacactcatggctgatctggtgaaagaaggtgtcttactgatcgat
catcggcgattactcgcaaaagatgacattgagccagagaaacgtcgtggaactatcttt
gatgtattgaatgatcagggtgacgcggtcgtgcgatgggtcgtagagataccaggagat
actgaaagtcgcgtgtggcgtgatacgaaagtatgggacagttggatcgactattacctg
aatcacagatcaggaacaagcgaaatctgtttcgtgatcggagaagagcggacgctgacc
aacaatcacccaaaatatattcgccgtgaaggagacaatgccaaactaatctcgtccaat
gatacccaaggttttacctttcgcggacgatttatcaccgacgagcaggcttgtagcgtc
agtttagaggcgtcgcataaagcacattacgcactaatgtggttgatcgaccgacagggg
taccgtgacggtgatctggcgattgttgcctgggcaatctcgggcgcgacagtgacagtg
ccacaaccaaccgatgacccgattgccactctcttcggcgatctcccatctgatgacaag
agtattgacactgctcaggacgtcgctattcgcctgaagaagaaaatcgctggctatcgc
caggagattggtgatcgaacggacgtcgttgtgatgggggttgactcggcgacgccaggg
cgattggcggttatctattatcgcaccttgaaaggttcggattttcttgatcgcatcgaa
acatggcatgacacctgcgcctggcgacacacctatcgggtgattgaagaacgcgataca
aatgggaagctttacaggcgcaggattccatttattggcgcacctgcgccggctgacatt
gctgaggcggcgtatggtcgtcgtcttgatgacagattgaagcaggcaacgattaagcgt
ctgcttccctgcattgtggatggtcaaccgttaccgcgtgatctggttgagtcagcgatc
aggcgggcttccaacccggtcgttttgagcgatgaccagaaggagaaagtccttaccatc
gcctgtgcactctaccgaaaatatatgtatggaaaggagcaatacgacatggcgctcgat
gaaaccaggagaacgagggattatctctacggtcgtttgttggcgattgctgatgttatt
gaagagcgagcactctataaagcagagcaaaatcgtccaacaaacgcaatccgctatatg
cagcaattttcacagcgccccttccgcacatggaagcagattcacgatctgctcatgcct
tatctcatgcgtctgggcggtagagcctactactacaagaacctgattgcagaggttgag
agcatgtttacacctgaagactttgtgagtacaagatcgctcagcggcgagtatttgctc
ggtttctactgtcagcggcagaaactgctggaaaaacgggctgatgacagggaagatgat
aatgatggcacatccatctaa

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