Rhodococcus rhodochrous: 4535765_00390
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Entry
4535765_00390 CDS
T05521
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03030
DNA replication
rrt03430
Mismatch repair
rrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4535765_00390 (dnaX_2)
03430 Mismatch repair
4535765_00390 (dnaX_2)
03440 Homologous recombination
4535765_00390 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrt03032
]
4535765_00390 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
rrt03400
]
4535765_00390 (dnaX_2)
Enzymes [BR:
rrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4535765_00390 (dnaX_2)
DNA replication proteins [BR:
rrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
4535765_00390 (dnaX_2)
DNA repair and recombination proteins [BR:
rrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
4535765_00390 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
DnaX_C
AAA_19
Rad17
AAA_14
AAA_16
Mg_chelatase
DEAD
Motif
Other DBs
NCBI-ProteinID:
SNV10215
LinkDB
All DBs
Position
1:421254..423545
Genome browser
AA seq
763 aa
AA seq
DB search
MHVGSRRYARRVALYRKYRPATFAEVVGQEHVTVPLSTALDTGRINHAYLFSGPRGCGKT
SSARILARSLNCETGPTSAPCGTCRSCVSLGPGGGGNLDVTELDAASHGGVDDTRELRDR
AFYAPAESRYRIFIIDEAHMVTTQGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRT
HHYPFRLLAPTAMRGLLEQICGQENVPVEDAVYPLVIRAGGGSPRDSLSVMDQLLAGAGP
EGVTYERALSLLGVTDVALIDEAVDSLAAGDGAALFGTVEKVMDAGHDPRRFAVDLLERL
RDLILMKSVPDAAERGLVDAPGDVLERMRDEATRLGPATLTRYAEIVHAGLGEMRGATSP
RLLVEVMCARMLLPAASDTETAVLQRLERLEQGIVAAPAGGVAPKPVSAPAAPAAPPISP
DEPAARFQRPSQRRAVEAPPADPPREATPPQPEAPAQQAPVHQAPAQQAPVQPEPAQPAP
APTQAPAAAQPPAVPKEPQPQSVPDEVVAQEVPPAVPEESAAPEPEPEPEPEPEPARAAG
GPDAAQMRGVWSEVRAKVRERSRTVEVMLSGATVRSVDGTRVVLVHDSAPLAKRLADARN
ATVIADALKAVFGGEFEVTCVHGAAAAEAPSRTPAPEKNSRPAGQPRFSRPSQAKNAAAP
APVEAPAAPQRPAAAQSAAPTFTRPSVESVDDIPPPEAPDLPDDPGPGYDAPPPDPSQMT
EADVEEMFAEAATPGDPSTRRDPEEVAIELLKDVLGAKPLDEK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgtcggcagccgccggtacgctcggcgcgtggctctgtaccggaagtatcgacct
gcgaccttcgcagaggtggtggggcaggagcacgtcaccgtgcccctcagcacggcgctc
gacacgggccgcatcaaccacgcctacctgttctcgggtcctcgtggatgcggcaagacg
tcctcggcgcgcatcctcgcccgctcgctcaactgcgagaccggccccacgtccgcgccg
tgcggaacgtgccggtcgtgcgtgtcgctcggcccgggtgggggaggcaacctcgacgtc
accgaactcgacgccgcgagccacggcggtgtcgacgacactcgtgagctgcgcgaccga
gccttctacgctccggccgagtcgcgctaccgcatcttcatcatcgacgaggcgcacatg
gtcaccacgcagggcttcaacgccctgctcaagatcgtggaggagccgccggagcacctc
atcttcgtcttcgcgaccaccgagcccgagaaggtgctgcccaccatccggtcgcgcacg
caccactatcccttccggctcctcgctcccacggcgatgcggggtctgctcgagcagatc
tgcggccaggagaacgtgccggtcgaggatgcggtctatccgctggtcatccgtgccggc
ggtggatccccccgcgactcgctgtcggtgatggaccagctcctcgccggtgccggcccc
gagggcgtcacctacgagcgcgctctgtcgctgctcggcgtcaccgacgtcgccctcatc
gacgaagccgtcgattcgctcgcggccggcgacggcgcggcgctgttcggcaccgtcgag
aaggtcatggacgccgggcacgacccgcgtcgcttcgccgtcgacctcctcgaacgcctc
cgcgacctgatcctcatgaagtccgtccccgacgccgccgagcgcggactcgtcgacgca
cccggcgacgtcctcgagcggatgcgcgacgaagcgacccgtctcggccccgccaccctc
acccgctacgccgagatcgtgcacgccgggctcggcgagatgcgcggggcgacgtcgccg
cgtctgctggtcgaggtgatgtgcgcgcgcatgctcctccctgcggcgtccgacacggaa
accgcggtcctgcaaaggctcgaacggctcgaacagggcatcgtcgcggccccggcagga
ggtgtcgcgccgaagccggtgtcggcacccgccgcgcctgccgcgccgcccatctcgccc
gacgaacccgcggcacgtttccagcgcccctcccagcgccgggcagtcgaggcgccgcct
gccgacccgccccgcgaggccaccccgccgcaaccggaagcccctgcccagcaggcacct
gttcatcaggcacccgcccagcaggcgccggtgcagcccgaaccggcccagccggcacct
gccccgacgcaggctcccgctgcggcgcaacctcccgccgtcccgaaggagccgcagccg
cagagtgtgcccgacgaggttgtcgcgcaggaggttccgccggctgtgcccgaggagtcg
gctgcgcccgaacccgaacccgaacccgaacccgaaccagagcccgcccgcgcggcaggt
ggtcccgacgcagctcagatgcggggcgtgtggtcggaggtgcgcgcgaaggtccgcgaa
cgcagccgcaccgtcgaggtgatgctctcgggcgccaccgtacggtcggtcgacggcacc
cgcgtcgttctcgtgcacgactccgctccgctcgcgaagcgactcgccgacgcgcgcaac
gccacggtcatcgccgatgcgctgaaggcggtcttcggtggggagttcgaggtcacctgc
gtccacggtgccgctgctgcggaggcgccttccagaaccccggcgcccgagaagaattcg
cgtccggcgggtcagccgcgtttctcccggccgagccaggcgaagaacgccgcggcaccc
gcccccgtcgaagcccccgccgcgccgcagcgcccggcggccgcacagtcggctgctccg
acgttcacacgtccgtccgtggagagcgtcgacgatatcccgccgcccgaagcccccgac
cttcccgacgatccgggcccgggctacgacgcaccgccgcccgacccgtcgcagatgacg
gaggcggacgtcgaggagatgttcgccgaggcggccacgcccggcgacccgtcgacgcgc
cgcgatcctgaagaagtcgcgatcgagctgctcaaggacgtgctgggagcgaaaccgctc
gacgagaagtag
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