Rhodococcus rhodochrous: 4535765_01034
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Entry
4535765_01034 CDS
T05521
Symbol
gabD_2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00250
Alanine, aspartate and glutamate metabolism
rrt00310
Lysine degradation
rrt00350
Tyrosine metabolism
rrt00650
Butanoate metabolism
rrt00760
Nicotinate and nicotinamide metabolism
rrt01100
Metabolic pathways
rrt01120
Microbial metabolism in diverse environments
Module
rrt_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
4535765_01034 (gabD_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
4535765_01034 (gabD_2)
00310 Lysine degradation
4535765_01034 (gabD_2)
00350 Tyrosine metabolism
4535765_01034 (gabD_2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
4535765_01034 (gabD_2)
Enzymes [BR:
rrt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
4535765_01034 (gabD_2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
4535765_01034 (gabD_2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
4535765_01034 (gabD_2)
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Motif
Pfam:
Aldedh
DUF3102
Motif
Other DBs
NCBI-ProteinID:
SNV13995
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All DBs
Position
1:1084152..1085615
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AA seq
487 aa
AA seq
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MMGHMDAAELIRSVPTDLFLGGEWVAAENGATFGVHDPATGDELTRVADAAPGDALRALD
AAVAAGPEWAATPPRERAELLRTVWQKITDRADDFALLMTLEMGKALPESRSEVTYGAEF
LRWFSEEAVRIAGRYTPAPAGTGRVLVTKQPVGPCLAITPWNFPLAMGTRKIGPALAAGC
TIIVKPASETPLTIQLLAQLFDEAGLPKGVLSVLPSSHAGEVTGPLLEDPRLRKLTFTGS
TEVGRMLAEKAGRSLLRTSLELGGNAPFVVFEDADLDAAVEGAVAAKLRNGGEACTAANR
FHVHNSVRDAFVAKLTERMASYKLGPGTDPDATLGPLVNENQKKTVIELVQDAVSAGASV
RLGGEPADGPGWFYPATVLDDVPKQARILQEEVFGPVAAVTGFDTEEEALAAANDTRYGL
AAYIFTRDLDRALRVSHALETGIVGVNRGVVSDVAAPFGGIKDSGLGREGGTEGIEEFLE
TKYIALQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatggggcatatggatgctgcagaactgattcggtccgtccccaccgacctgttcctc
ggcggtgaatgggtggcggccgagaacggagccaccttcggagtccacgatcccgcgacc
ggcgacgaactgacccgtgtcgccgatgccgcgcccggcgacgccctacgggccctcgac
gcggccgtcgcggccggtcctgaatgggcagcgaccccgccgcgtgaacgcgccgaactg
ctgcggacggtctggcagaagatcaccgaccgcgccgacgacttcgcgctgctcatgaca
ctcgagatgggcaaggcgctgccggagagccgatcggaggtgacctacggcgccgaattc
ctgcgatggttctccgaggaagcggtccgcatcgccggtcgctacacgcccgccccggcc
ggcaccggccgcgttctcgtgaccaaacagcccgtcggcccctgcctggccatcacgccg
tggaacttcccgctcgcgatgggaacccgcaagatcggtcccgccctcgccgcggggtgc
acgatcatcgtcaagcccgcgtccgagacacccctcacgatccagctgctcgcgcagctc
ttcgacgaggcaggactgcccaagggcgtcctgtcggtgctgccgtcctcgcatgccggg
gaggtcaccgggccgctgctcgaggatccccggctgcgcaagctcaccttcaccggctcc
accgaggtcggtcgcatgctcgccgagaaggccggtcgttcgctgctgcgcacctcgctc
gaactcggcggcaacgcgccgttcgtcgtcttcgaggacgccgatctcgacgcggcggtc
gagggcgcggtggcggccaagctgcgcaacgggggagaggcctgcacggccgcgaaccgc
ttccacgtccacaattcggtgcgcgacgctttcgtcgccaagctcaccgagcgcatggcg
tcgtacaagctcgggccgggaacggaccccgacgcgacgctgggccctctggtcaacgag
aaccagaagaagaccgtgatcgaactcgtacaggacgccgtttcggcgggcgcctcggtg
cgcctgggcggggaacctgccgacggtccgggatggttctacccggcgaccgtcctcgac
gacgtgccgaagcaggcccgcatcctgcaggaagaggtgttcgggccggtcgcggccgtc
accggcttcgacaccgaggaggaagcgctcgcggcagcgaacgacacccgctacgggctc
gccgcctacatcttcacgcgcgacctcgaccgggccctgcgcgtgtcgcatgcactcgaa
acgggcatcgtcggtgtgaaccgcggtgtcgtctcggacgtcgcggccccgttcggcgga
atcaaggattccggcttgggacgcgagggcggtaccgagggcatcgaggaattcctcgag
accaagtacatcgccctgcagtga
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