Rhodococcus rhodochrous: 4535765_01036
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Entry
4535765_01036 CDS
T05521
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03420
Nucleotide excision repair
rrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4535765_01036 (pcrA_1)
03430 Mismatch repair
4535765_01036 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrt03400
]
4535765_01036 (pcrA_1)
Enzymes [BR:
rrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4535765_01036 (pcrA_1)
DNA repair and recombination proteins [BR:
rrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4535765_01036 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
4535765_01036 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
OstA_2
DEAD
ResIII
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SNV14002
LinkDB
All DBs
Position
1:1086175..1088553
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AA seq
792 aa
AA seq
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MNTPVALANSHPGSDALLEGLNPQQREAVTHEGAPLLIVAGAGSGKTAVLTRRIAYLLAE
RGVAPGQVLAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAGLLQGMN
SNFTIYDADDSRRLLTMIAKDLELDSKKYSARLLSTQISNLKNELIGPEEAAHEAETDSA
ATELTRVVARVYAHYQQRLRTANAFDFDDLIGETVALLQAHPQVAEYYRRRFRHVLVDEY
QDTNHAQYVLVRTLVGDPEEESAVPPSELCVVGDADQSIYAFRGATIRNIEEFERDYPQA
RTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELITGYVADNEHDEARFVA
AEIDRLVDGGDTTYSDIAVFYRTNNASRAFEDVFIRHGVPYKVVGGVRFYERKEVRDIVA
YLKVLDNPDDTVSLRRILNTPRRGIGDRAEACVAVHAERLGVGFGQALADAAVGKVALLN
TRAQKAIAGFVEMMDDLRAMLVASDADGNDTADIGDIVEAILERTGYSAELSASDDPQDG
ARLDNLHELVSVAREFSADVRNAAGIVDDVREEGDPEPGSLAAFLEKVSLVADADQIPEN
ESGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARRR
LYLTRAVLRSSWGQPLTNPESRFLQEIPQHLIDWRRLEPTPARGQAIGSGTGSRFGAGER
RGSSGTPSFGAARGRNNQLVLDVGDRVSHDKYGLGTVLETRGSGPTATVVIDFGSAGKVR
LMLVGGVPMIKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcccgtcgcgctcgcaaactcccacccaggatccgatgctcttctcgaaggg
ctcaatccgcagcagcgggaagcggtcacgcacgaaggggccccgctgctgatcgtcgcg
ggcgcgggctccggcaagactgcggtgctcacgcgccgcatcgcctatctgctggccgag
cgcggcgtcgcccctggtcaggtgctcgccatcacgttcaccaacaaggccgcggccgag
atgcgcgagcgggtggcggccctggtggggccgcgcgcgaatgcgatgtgggtctcgacc
ttccactcgagctgcgtccggatcctgcgcgcgcaggcgggtctgctgcagggcatgaat
tcgaatttcacgatctacgacgccgacgattcccgtcgtctgctcacgatgatcgcgaag
gatctcgaactcgacagcaagaagtactccgccaggctgctgtccacgcagatctcgaac
ctgaagaacgaactgatcgggcccgaggaggccgcccacgaggcggagaccgattcggcg
gccaccgaactcacccgcgtcgtcgcccgggtctacgcgcactaccagcagcgcctgcgc
acggcgaatgccttcgacttcgacgacctcatcggcgagacggtggcgctgctgcaggcg
catccgcaggtcgccgagtactaccggcgccggttccgccacgtgctggtcgacgagtac
caggacaccaaccatgcgcagtacgtgctggtgcgcaccctcgtgggtgatcccgaggag
gagtccgccgtccccccaagcgaactgtgcgtggtgggcgacgccgaccagtcgatctac
gccttccgcggcgccacgatccgcaacatcgaggagttcgagcgcgactatccgcaggcg
cgcacgatcctgctcgagcagaactatcgctccacccagaacattctgtcggcggcgaat
tccgtcatctccaagaacacggggcgccgcgagaagcggctgtggaccgattcgggcgaa
ggtgaactcatcaccggctacgtcgccgacaacgagcacgacgaggcgcggttcgtcgcc
gccgagatcgatcggctcgtcgacggcggcgacaccacctactccgacatcgcggtgttc
taccgcaccaacaatgcttcccgcgcgttcgaggatgtcttcatccggcacggtgtgccc
tacaaggtcgtcggcggtgtgaggttctacgagcgcaaggaggtgcgcgacatcgtcgcg
tacctgaaagtgctcgacaatcccgacgacacggtgagcctgcgccgcattctgaacacc
cctcgccgcggtatcggcgatcgcgccgaagcgtgcgtggcggtgcacgccgagcggctc
ggtgtcggcttcgggcaggccctcgccgacgccgcagtcggcaaggtcgcgctgctgaac
acgcgggcgcagaaggcgatcgccggtttcgtcgagatgatggacgacctgcgggcgatg
ctcgtcgcgagcgacgccgacggcaacgacacggccgacatcggcgacatcgtcgaggcg
atcctcgaacgcaccgggtacagcgcagagctgtcggcgagcgacgatccgcaggacggc
gcccgtctcgacaacctccacgaactcgtcagcgtggcaagagaattcagcgccgacgtg
cgcaacgcggccgggatcgtcgacgacgtacgcgaagagggcgatcccgaaccgggatcg
ctcgcggccttcctcgagaaggtctcgctcgtcgccgacgccgaccagatcccggagaac
gagtccggtgtggtcacgctgatgacgctgcacaccgctaagggcctcgagttcccggtc
gtcttcgtcaccggttgggaggacggccagttcccgcacatgcgtgccctgggcgatccg
gccgagctgtccgaggaacggcgactcgcgtacgtcggcatcacccgagcccggcgtcgt
ctctacctcacgcgcgccgtgctgcggtcgtcctggggacagcccctcaccaatccggaa
tcccgcttcctgcaggagattccgcagcatctcatcgactggcgacgcctcgagcccaca
cccgcgcgcgggcaggcgatcggctcgggcaccggttcacggttcggtgcgggcgagcgg
cgcggttcgtcgggcacgccgagtttcggtgcggcgcgcggacgcaacaaccagttggtg
ctcgacgtcggcgatcgcgtcagccacgacaagtacggtctgggaacggttctcgaaacc
cggggctcgggccccacggccaccgtcgtgatcgacttcggcagcgccggcaaggtgcgg
ctgatgctcgtcggcggtgtgccgatgatcaagctgtga
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