Rhodococcus rhodochrous: 4535765_01083
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Entry
4535765_01083 CDS
T05521
Name
(GenBank) WD-40 repeat-containing protein
Organism
rrt
Rhodococcus rhodochrous
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
AAA_16
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_DCAF4
AAA_22
Beta-prop_SCAP
DUF7165
Beta-prop_VPS8
Cytochrom_D1
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
SNV14238
LinkDB
All DBs
Position
1:1132578..1136552
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AA seq
1324 aa
AA seq
DB search
MSETGGKPGSAQRQFFADQLRMLFAAAGRPALKKVVSDAATVARAVGSDRTVSVQRVSDW
RSGNRMPANFESVHPVLVVLIRAARELNAEPPAPGLYSLKQWENWWKAARGQANAPRTKE
SASVSVPPGIRPYKGLASYRQNDARLFFGRAQSVRTLADVVTASHGQGPVVVTGASGVGK
SSLVQAGLIPQLCSAPDCHPVVLTPGTDPVARLVDALPELADVDDPADHTAVHAALRAAT
SRTSSSLLLIVVDQIEELFTQCSDVALRTEFLTLLETASTGSDGDAPALVVATMRSDFYD
QAVATPVLARALERRTKTVQPLDRDDLVEVITAPAKLVGVRLEPGLVDLILHDLTGLADG
EISGTELPLLSHLLDSLWDKRSGGTLTVAAYRATGGVRGSVAAGAERAWESLADDSDRAR
ARSMLVHLVYVTTTGTDVKIARSLKELLAVGGEDRDASKRVLDHFVSARVLVVDADYVEL
IHDAVIDAWPRLKSWIQQDRAGAALRQQIEADASTWLGSGRNRELLYQRGRMDVVSEQNP
HLAMAGTPEDRRGPVALSPTAVAFLDASRRQIARETRTRRVGIAAMALSTIIAFVMTGLA
WDAKSRAETARSTAQFQQIVALSDSLRDEDPTISANLALVAAELQPDSPVAYSRLIASQA
VPLAYTLSGHTGPVYGVVVSPDGSTLASASDDGTVRLWALDGDEPSAVGEPLQLSSKYMA
SVSFSPDGRFLAIGAGDGGVWIYDASDRAAPRVVLDRQVYADGAVHNVRYSPNGRVLAVP
YDDGHVALVDTSDPGSGRFPVTLVDEHDGGVRTVAFRPGGQVLATSSDDRTVRLWDVSMP
SRPVPLGEPLTGFGDVAHSVSFNGDGTILAASSDDGVLHLFDTTDPRAARPLGVPTNAHT
GGVWNIAFLPDGRTLASASWDGTAKLWDVDPSTRTLDEIGPPLTGHGGGVPTLAVSPTGT
TVVTGGQDSNVRVWTMPRTRVAVADGALTRPAIDRAGALVATGSYGPDVTLWRVGQGGDW
NRAGGIALPRPLGGAYVCALSPSGTILATAPTSGGSVQLWDVRDPATPKPFGDPVPLDTR
FTSALAFGPDGTTLVTGADDFSVQLWDIADPAEPVPWGRPLTGPKNLVRSAAISPDGRSL
VVTSADSEIYAWDVTDPRSPRRVNVSDGHSTGVNTVAFGGSSDVLVTGGDDHDVVVWDRT
ESGDFVARETRLSGHTGTVYSVSITPDGTRAVSGSDDGTVRLWDVADPGGMHEIGGPVTD
MGTGRWQVTFAPDGTIVAAGGDGLLRTWGLDADAVVARICRSTSVRLEEVLDRYELPSPP
DEVC
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaccggcggaaagcctggttcggcgcagcgtcagttcttcgccgaccaactg
cggatgctgttcgccgcagccggtcgccccgccctcaagaaggtcgtctcggatgccgcg
accgtcgcccgggcggtgggcagcgaccggaccgtctccgtccagcgggtcagcgactgg
cgcagcggcaaccggatgccggccaacttcgagtcggtgcatccggtgctcgtggtcctc
atccgcgcggcgcgggagctcaacgccgaaccgccggcccccggtctgtactccctgaag
cagtgggagaactggtggaaggccgcgcgcggccaggcgaacgctccgcgcaccaaggaa
tcggcatcggtatcggtgccgcccgggatccgtccttacaagggactcgcctcctatcgg
cagaacgacgcccggttgttcttcgggcgcgcccagagcgtgcggaccctcgccgacgtg
gtgacggcctcccacgggcagggcccggtcgtggtgaccggtgcctccggcgtcggcaag
tcctcgctagtgcaggccggtctcattccgcagctgtgttccgcgccggactgccacccg
gtggtcctcacccccggcaccgacccggtggcacgactcgtcgacgcgctccccgaactg
gccgacgtcgacgaccccgccgaccacaccgccgtccacgcggccctgcgtgccgcgacc
tcccgtacgtcgtcgtccttactgctgatcgtcgtcgaccagatcgaggaactgttcacc
cagtgcagcgacgtcgctctgcgcaccgagttcctcaccctgctcgagacggcgtcgacc
ggttcggacggcgacgcgcccgccctcgtcgtcgcgacgatgcggtcggacttctacgac
caggcagtggccacccccgtgctcgcccgggccctcgaacggcggaccaagaccgtccag
cccctcgaccgcgacgatctcgtcgaggtcatcaccgcgcccgccaaactcgtgggggtc
cgcctcgaacccggtctcgtcgacctcatcctccacgacctcaccggactggccgatggt
gagatcagcggcaccgagcttcccctgctgtcccacctgctcgactccctgtgggacaag
cgcagcgggggcacgctcaccgtcgccgcctaccgcgcgaccggcggggtccgcggatcc
gtcgccgccggcgccgaacgggcgtgggagagtctcgccgacgattccgaccgtgcccgt
gcccgctcgatgctcgtccacctggtgtacgtcaccacgaccggcacggacgtcaagatc
gcgcggtcgctgaaggaactgctggcggtgggcggggaggatcgcgacgcgtcgaagcgc
gtcctcgaccatttcgtgtcggcacgtgtgctcgtcgtcgacgccgattatgtcgaactc
atccacgatgcggtgatcgacgcgtggccccgactcaagtcctggatccagcaggaccgc
gccggtgccgccctgcgacagcagatcgaggccgacgcgtcgacctggctcggctccgga
cgcaaccgcgagttgctctaccagcgcggacgcatggacgtcgtgtccgagcagaatccg
cacctcgccatggcgggcacccccgaggaccggcgcgggccggtcgcgctcagtcccacc
gcggtggccttcctcgacgcctcccgccggcagatcgcccgcgagacccggacccggcgg
gtcggcatcgccgcgatggcgctgtccacgatcatcgcgttcgtcatgaccggactggcc
tgggacgcgaagagccgggccgagacggcacggagcaccgcgcagttccagcagatcgtc
gcgctgtccgactccctgcgggacgaggaccccacgatctcggcgaacctggcgctcgtc
gcggccgaactccagcccgacagcccggtcgcgtactcgaggctcatcgccagccaggcc
gtgcccctcgcctacacactgagcggacacacggggccggtctacggcgtcgtcgtttcc
cccgacgggtccaccctcgcgtcggcgagcgacgacggcaccgtccgcctgtgggcactc
gacggcgacgaaccgtccgccgtgggcgagccgttgcagttgtcgtcgaagtacatggcg
tccgtctcgttcagccccgacggccgtttcctcgcgatcggggcaggtgacggcggtgtg
tggatctacgacgcgtccgaccgtgccgcgccgcgcgtggtgctcgaccggcaggtctac
gccgacggcgccgtgcacaacgtgcggtactcacccaacgggcgggtgctcgccgtgccc
tacgacgacgggcacgtcgcactcgtcgacacctccgatcccggatcgggccggttcccc
gtcaccctggtcgacgagcacgacggtggtgtgcggacggtggccttccgtcccggcggg
caggtcctcgccacgtccagcgacgaccgcaccgtccggctgtgggacgtgagcatgccc
tcgcggccggtgccgctcggcgagccgctcaccggtttcggcgacgtggcccattcggtg
agcttcaacggcgacggcacgatcctcgcggcgagcagcgacgacggtgtgctgcacctg
ttcgacaccaccgatccgcgcgcggcccgcccgctgggggtgccgacgaacgcccacacc
gggggtgtctggaacatcgcgttcctccccgacggacgcacgctggcgagcgcgtcgtgg
gacggcaccgcgaaactgtgggacgtcgacccgtcgacgcgaaccctcgacgagatcggc
ccgccgctgaccgggcacggaggcggtgtcccgacgctcgcggtgagcccgaccggaacc
accgtcgtcaccggcggacaggattccaacgtccgggtgtggacgatgccccggaccagg
gtggcggtggccgacggtgcgctgaccaggccggcgatcgatcgtgccggtgccctcgtc
gcgaccggcagctacggaccggatgtcacgctctggcgggtgggtcagggcggcgactgg
aaccgcgccggtgggatcgcgttgccgcgtccgctcggtggtgcgtacgtgtgtgcgctc
tcgccgtcgggcacgatcctggccacggcaccgacgtccggcggcagcgtgcaactgtgg
gacgtgcgcgatccggcgaccccgaagccgttcggcgatccggtgccgctcgacacgagg
ttcacctccgccctggcgttcggacccgacggcacgaccctcgtgaccggcgccgacgac
ttctcggtgcagttgtgggacatcgcggatcctgccgaaccggtgccgtggggccggccg
ctgacgggaccgaagaatctcgtgcgcagtgccgccatcagccccgacggccgaagtctc
gtggtcacgagcgccgacagcgagatctacgcctgggacgtgaccgatccacgctccccg
cggcgggtgaacgtctcggacgggcactccaccggagtgaacaccgtggccttcggtgga
tcgagcgatgtgctggtgaccggcggggacgaccacgacgtggtggtctgggaccgcacc
gagtccggtgacttcgtcgcccgcgagaccaggttgagcggccacaccggcacggtctac
tccgtctccatcacccccgacggcacccgcgcggtcagcggcagcgacgacggcaccgtc
cgtctgtgggacgtcgccgacccgggcggcatgcacgagatcggtggcccggtcaccgac
atgggaacgggacgatggcaggtgaccttcgcgcccgacggcaccatcgtcgccgccggt
ggcgacggtctgctccgcacatgggggctcgatgccgatgccgtcgtggcccgcatctgc
cgttccacctcggtgcgactcgaggaggtcctcgaccgttacgagttgccgtcgcctccc
gacgaggtgtgctga
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