Rhodococcus rhodochrous: 4535765_01325
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Entry
4535765_01325 CDS
T05521
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4535765_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrt03400
]
4535765_01325
Enzymes [BR:
rrt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
4535765_01325
DNA repair and recombination proteins [BR:
rrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4535765_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SNV15303
LinkDB
All DBs
Position
1:complement(1404379..1405137)
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AA seq
252 aa
AA seq
DB search
MNPTSGQGPLHGTPPATLAELDDALVDCRACPRLVAWREQVAREKRAAFRDEEYWGRPVP
GFGPADASLLIVGLAPAAHGGNRTGRMFTGDRSGDVLYAALYDAGLASQPTATHIGDGLE
LFGTRITSPVHCAPPANRPTVVERDTCRHWLEQELDLLSPTLRSVVVLGGFGWQALLPVL
SAAGWAIPVPRPKFGHGAHVLLAPTEAREYPLHLFGCYHVSQQNTFTGRLTKEMVTDVLR
DAARAASLQPPG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccacgtccggacaaggccccctgcacggcactcccccggcaacgctggccgaa
ctcgacgatgcgctcgtcgactgccgcgcatgtccgcggctggtcgcgtggcgtgagcag
gtcgcgcgggagaaacgagcggccttccgcgacgaggagtactggggccggcccgtcccg
ggcttcggtccggccgatgcgtccctgctgatcgtcgggctggcccccgccgcgcacggc
gggaaccgcacgggacggatgttcacgggagaccggtcgggtgacgtgctgtacgcggcc
ctgtacgacgcgggactcgcatcacaaccgaccgcgacacacatcggcgacggtctcgaa
ctgttcggcacgcgcatcacatcgccggtgcactgcgcgccaccggccaatcgccccacg
gtcgtcgaacgcgacacctgccggcactggctcgaacaggaactcgacctgctctctccc
acactgcggtcggtcgtcgtcctcggcgggttcgggtggcaggcgctactgcccgtcctg
tcggctgcggggtgggcgatcccggttccccgtccgaagttcgggcacggcgcacatgtg
ctgctcgctcccaccgaggcgcgggagtacccgttgcatctgttcggttgctatcacgtc
agccagcagaacaccttcaccggccggttgaccaaggagatggtgaccgacgtgctcagg
gacgcggcgcgggctgcgtccctccaaccgcctgggtga
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