Rhodococcus rhodochrous: 4535765_01477
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Entry
4535765_01477 CDS
T05521
Symbol
polC_1
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03030
DNA replication
rrt03430
Mismatch repair
rrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4535765_01477 (polC_1)
03430 Mismatch repair
4535765_01477 (polC_1)
03440 Homologous recombination
4535765_01477 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrt03032
]
4535765_01477 (polC_1)
03400 DNA repair and recombination proteins [BR:
rrt03400
]
4535765_01477 (polC_1)
Enzymes [BR:
rrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4535765_01477 (polC_1)
DNA replication proteins [BR:
rrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
4535765_01477 (polC_1)
DNA repair and recombination proteins [BR:
rrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
4535765_01477 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
SNV15879
LinkDB
All DBs
Position
1:1579257..1581059
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AA seq
600 aa
AA seq
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MIEVHAPAEGAVMLPRDHRWVVVDVETSGVRPNAHRVLSVAALVLREDGSVEREFSTLVD
PGCDPGPVHVHNLTRERLAGSPQFEDIAGELAGILDGATIVAHNASFDYGFLDAEFRRAG
TSLPAEHRLCTLALSRRLELDVPNYRLATLAQHWQVQQLQEHDAYDDARVLSEIFLRSAA
MADNLQLPLPVVNCRSRKSVYPASVPRVACQWKNPGRLGDDGLVQGMRVVISGSTVTPRV
ALANRLTDAGLDVMNNASKQTSVVVCNDPTVQTAKVRKAMAEGIPVISEQQLEDLLTRVR
PGEPKVATVVDIISPPEPQVAVAPPVRPLTGQKPKLWTGRKVLLLGGTHLQAVMMRSRLT
QLGARPALNFTAAVTDVLVLEGGEADKRMARVAARELPVLRPDDVDAAVEKGIVPPHMRV
ESWLTAPVLSRGEVIDLPTDSHRWAVNVAWKAETTGDEFDLDVVAFLLGADEKVDTDDDF
VFYNNPLYDDGVVELTIDGSSEHCIRVDLAELPAECERIAIAAAIDGNRTFGELGAVSVG
VDSDSGTAATFVLDAGTTERTMVLAEIYRRAGKWRLRAVGQGYDDDLAALARRYGVDVDD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagtgcacgcgcccgcggagggggccgtgatgttgccccgcgaccatcggtgg
gtggtggtcgacgtcgagacctcgggagtgcgtcccaacgcccaccgggtcctgagcgtg
gcggcgctcgtattgcgcgaggacgggtccgtggagcgggagttctcgaccctcgtcgac
cccggctgcgatccggggccggtgcacgtccacaacctcacacgggagcgcctcgccggg
tcgccgcaattcgaggacattgccggtgaactggccgggatcctcgacggcgccacgatc
gtcgcgcacaacgcgtcgttcgactacggattcctcgacgccgagttccgccgggccggc
acgtcactcccggccgagcatcgcctgtgcacgctcgcgttgtcgcgccgactcgaactc
gacgtccccaactaccggcttgcgaccctcgcacagcactggcaggtccagcagctgcag
gagcacgacgcgtacgacgacgcgcgcgtcctgtcggagatcttcctgcgcagcgccgcg
atggccgacaacctgcagttgccgctgcccgtcgtgaattgtcgcagtcgcaagtcggtg
taccccgcctccgtcccgcgggtcgcgtgccagtggaagaacccgggtcgcctcggcgac
gacggcctcgtccagggcatgagggtcgtgatcagcggttccaccgtcaccccgcgggtc
gcgctcgcgaaccggctgaccgacgccgggctcgacgtgatgaacaacgcgagcaagcag
accagcgtcgtggtgtgcaacgaccccaccgtgcagaccgccaaggtccgcaaggcgatg
gccgagggcatccccgtgatcagcgagcagcagctcgaggacctgctgacgcgagtgcgg
ccgggtgaaccgaaggtcgcgacggtcgtcgacatcatttcgccgccggaaccgcaggtc
gcggtggcgcctccggtccggccgctgaccgggcagaagcccaagctgtggaccggacgc
aaggtgctgttgctcggcggcacgcacctgcaggccgtcatgatgcgctcgcgcctcacc
cagctcggtgcacgcccggccctcaacttcacggccgccgtcaccgacgtgctggtcctc
gaagggggagaggccgacaagcggatggcgcgggtcgccgcgcgcgagctgcccgtcctc
cggcccgacgacgtcgatgccgcggtggagaagggcatcgtgcccccgcacatgcgcgtg
gagtcgtggctgacggcaccggtgctgtcacgcggcgaggtgatcgacctgccgaccgac
agtcaccgctgggccgtgaacgtcgcgtggaaggccgagacgaccggcgacgagttcgac
ctcgacgtcgtggcctttctgctgggtgccgacgaaaaggtcgacaccgacgacgatttc
gtcttctacaacaacccgctctacgacgacggcgtcgtcgaactgaccatcgacggttcg
agcgagcactgcatccgggtcgacctcgcggagctccccgccgaatgcgaacgcatcgcc
atcgccgcagccatcgacggcaaccgcaccttcggcgaactcggcgcggtgtccgtcggc
gtcgacagcgacagcggcaccgccgcgacgttcgtgctcgacgccggcaccaccgaacga
accatggtcctcgccgagatctaccgccgcgccggcaaatggcggctgcgcgcggtgggg
caggggtacgacgacgacctcgcggccctcgcacgccggtacggggtggatgtcgatgac
tga
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