Rhodococcus rhodochrous: 4535765_01588
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Entry
4535765_01588 CDS
T05521
Symbol
ykoD
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
rrt
Rhodococcus rhodochrous
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrt02000
]
4535765_01588 (ykoD)
Transporters [BR:
rrt02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
4535765_01588 (ykoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
DUF2232
AAA_29
AAA_16
nSTAND1
AAA_23
AAA_5
AAA_13
DEAD
NACHT
SbcC_Walker_B
Mg_chelatase
AAA_28
Zeta_toxin
DUF87
Motif
Other DBs
NCBI-ProteinID:
SNV16343
LinkDB
All DBs
Position
1:1711651..1713576
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AA seq
641 aa
AA seq
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MLSVVTGLIPVGVAQVLVALPVAFLAATGRLRAIVAATVAAGVVALVAGGPFAVAAVVVL
SGIGTLVGFAHRRWGHAAVFMVLAGSVPAGLLLAAAVCGLLLVFDRTRVLLLEALEASMR
GTIRAFEAAGAGQQFVDTWDRTLEIMVRLWWVWIGGAVLVGTVGTALLCFGIFRVVALRS
TWATRSVDWPEQDPTADPDPLPVALRLAGYRYPGTERDALSDIDLTIGAGEFVAIVGGNG
SGKSTLVRLLAGLEPTVGLVDRPGPVGPGRPGGTAMILQHPESQVLGRTVAEDLRWGIDD
VDVEDLLARVGLAGMEDRATEDLSGGQLQRLALAGALARRPALLIADEITAMVDADSRAD
LIRLLSDVARDGTAVVLVTHLDDEARAADRIVHIADGRIVPQIAPPPLPAPVPATAPSFP
QPVLELRDVTHVYAAGTPWAHTALREVSLTICRGEGVLVVGENGSGKSTLAWIVAGLMRP
THGTAVLHDTPTADLHGEVGMVFQQARLQLQRPTVAQEISEVAGLPHTDRGYVAAVLHRV
GLRPELIDRPIDRLSGGEMRRVAIAAQLARTPRVLVLDEPLAGLDLRGRREVVSILAHLR
AVEHVTVVVISHDLHGMEEVCSRTVVLADGRIVEQTGAVIA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtcggtcgtcacggggctgatacctgtcggtgtcgcccaggtgctcgtcgcgctc
cccgtcgccttcctcgcggccaccgggcgactgcgcgcgatcgtcgccgcgaccgttgcc
gccggagtggtcgcgctcgtggccggcggaccgttcgccgtcgccgcggtcgtcgtcctc
tccggtatcggaacgctcgtcgggttcgcgcaccgccggtggggtcacgccgcggtgttc
atggtgctggccggatccgtcccggccgggttgctgctcgccgccgccgtctgcggtctg
ctgctggtcttcgaccggacccgggtactgctgctcgaggcgctcgaagcgtcgatgcgc
gggacgatccgggcgttcgaggcagcgggtgcgggtcagcagttcgtcgacacctgggac
cggaccctcgagatcatggtgcgtctgtggtgggtgtggatcggtggcgcagtgctcgtc
ggaaccgtgggcaccgcactgctgtgcttcgggatcttccgggtggtggcgctgcgcagt
acgtgggcgacccgatccgtcgactggcccgagcaggaccccacggccgacccggatccg
ctgcccgtcgcactgcgcctggccggctaccggtatccgggaaccgagcgcgacgccctg
tcggacatcgacctcacgatcggagccggggagttcgtcgcgatcgtcggcggcaacggc
tcgggcaagtcgacactcgtgcggctgctcgcgggactcgagccgaccgtcggcctggtc
gaccggcccggacccgtcgggccgggacgccccggtggcaccgcgatgatcctgcaacat
cccgagagccaggtgctcggtcgcacggtcgccgaggacctgcggtgggggatcgacgac
gtcgacgtcgaggatctgctcgcccgcgtcggcctcgccgggatggaggaccgcgccacg
gaggatctgtcgggcgggcaactgcagcgactggcactggcgggcgcactggcccggcga
cccgcgttgctcatcgccgacgagatcaccgcgatggtcgacgcggacagccgcgcggac
ctgatccgattgctctcggacgtcgcgcgggacggtaccgcggtcgtgctcgtcacccac
cttgacgacgaggcccgcgccgccgaccgcatcgtgcacatcgccgacggccggatcgtc
ccgcagatcgcgccgccgcccctgccggcgccggtcccggcgaccgccccgtccttccca
cagccggtcctcgaactacgggatgtcacgcacgtctacgcggccggaacaccctgggcg
cacaccgccctgcgcgaggtgtcgctgacgatctgccgcggcgaaggggtgctcgtcgtc
ggggagaacggttcgggcaagtcgacgctcgcgtggatcgtcgccggactgatgcgtccc
acgcacggaacggccgtcctgcacgacaccccgaccgccgacctgcacggggaagtgggc
atggtcttccagcaggcccggctccagttgcagcgaccgaccgtcgcgcaggagatctcc
gaggtggccggacttccgcacaccgaccgcggttacgtcgccgccgtcctgcaccgggtg
ggtctgcgtcccgaactgatcgaccggccgatcgatcggctcagcggcggagagatgcgg
cgggtcgcgatcgccgcccagctcgcccgcaccccgcgggtgctcgtgctcgacgaaccg
ctggccgggctggacctgcggggccgccgcgaagtggtgtcgatcctcgcccatctacgg
gcggtcgagcacgtcaccgtcgtcgtcatctcccacgacctgcacggcatggaggaggtg
tgttcgcgcaccgtggtgctcgcggacggacgcatcgtggagcagacgggagcggtgatc
gcatga
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