Rhodococcus rhodochrous: 4535765_01905
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Entry
4535765_01905 CDS
T05521
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt02024
Quorum sensing
rrt03060
Protein export
rrt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
4535765_01905 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
4535765_01905 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
4535765_01905 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rrt02044
]
4535765_01905 (ffh)
Enzymes [BR:
rrt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
4535765_01905 (ffh)
Secretion system [BR:
rrt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
4535765_01905 (ffh)
Eukaryotic Sec-SRP protein
4535765_01905 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
ArsA_ATPase
APS_kinase
AAA_22
nSTAND3
Zeta_toxin
AAA_31
AAA_18
NPHP3_N
Thymidylate_kin
AAA_24
TsaE
AAA_33
MobB
AAA_16
MeaB
TctA
NTPase_1
6PF2K
ATP_bind_1
AAA_30
hnRNP_Q_AcD
NACHT
Motif
Other DBs
NCBI-ProteinID:
SNV17557
LinkDB
All DBs
Position
1:2061940..2063508
Genome browser
AA seq
522 aa
AA seq
DB search
MFESLSDRLTGVLKDLRGKGRLSDADIDATCREIRLALLEADVALPVVREFIKKIKVRAK
GAEVHGALNPAQQVVKIVNEELVGILGGETRRLQFAKTPPTVIMLAGLQGAGKTTLAGKL
AKWLKAQGHTPMLVACDLQRPGAVTQLQVVGERAGVSVFAPHPGTSIGGGENELGVTAAD
PIAVAEQGIAEARNKQYDVVIVDTAGRLGIDQELMAQAAGIRDAVQPDEVLFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVRELTGQPIMFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAEQAEATASKIGSGELTLEDFLEQMMAVRKMGPIA
NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPEERANPKIINGSRRLRIANGSGVK
VSDVNQLVDRFFEARKMMTAMAGQMGMPGARKNQRKKGKKGKKGGRGPTPPKVRGGMPGG
FPGLPGGMPAGMPDLSKMPKGLDELPPGLENFDLSKLKFPKN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgacaggggtcctgaaggacctgcgcggcaagggg
cggctgtccgacgcggacatcgacgcgacctgccgtgagatccgcctcgccctgctcgag
gccgacgtcgcgctgcccgtggtgcgcgagttcatcaagaagatcaaggtgcgcgccaag
ggcgccgaggtgcacggcgcgctgaacccggcccagcaggtcgtcaagatcgtcaacgag
gaactcgtcgggatcctcggcggcgagacccgtcgtctgcagttcgcgaagaccccgccg
acggtcatcatgctcgccggtctgcagggtgccggtaagaccaccctcgcgggcaagctc
gcgaagtggctcaaggcgcaggggcacaccccgatgctggtcgcctgcgacctccagcgc
cccggcgctgtcacgcagctgcaggtggtcggtgagcgtgccggcgtgtcggtcttcgct
ccgcatcccggcacctccatcggcggtggcgagaacgaactcggagtcaccgccgccgac
ccgatcgccgtggcggagcagggcatcgccgaggcgcgcaacaagcagtacgacgtggtc
atcgtcgacaccgccggtcgcctcggtatcgaccaggaactcatggcgcaggccgcgggc
atccgcgacgcggtgcagcccgacgaggtgctgttcgtcctcgacgcgatgatcggtcag
gacgccgtgagcaccgccgaggcgttccgcgagggcgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgcccgcggtggtgccgcgctcagcgtccgcgagctcaccggc
cagccgatcatgttcgcctccaccggtgagaagctcgaggacttcgacgtcttccacccc
gagcgcatggccagccgcatcctcggcatgggcgacgtgctcaccctgatcgagcaggcc
gagcaggtcttcgacgccgagcaggccgaggccaccgccagcaagatcggttccggtgag
ctcaccctcgaggactttctcgagcagatgatggccgtgcggaagatgggccccatcgcc
aatctcctgggcatgctgcccggagccgggcagatgaaggacgccctcgccaacgtcgac
gagaagcagctcgaccgcatccaggcgatcatccgcggcatgacgccggaggagcgcgcc
aacccgaagatcatcaacggctcgcggcgactgcgcatcgccaacggttccggtgtgaag
gtctccgacgtcaaccagctcgtcgaccggttcttcgaggcccggaagatgatgacggcg
atggccggccagatgggcatgccgggcgcacgcaagaaccagcgcaagaagggcaagaag
gggaagaagggcggtcgcggaccgacgccgccgaaggtgcggggcggtatgcccggtggc
ttccccggtcttccgggtggcatgccggccgggatgcccgacctgtcgaagatgccgaag
ggcctcgacgagctgcctccgggtctcgagaacttcgacctgtcgaagctgaagttcccc
aagaactga
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