Rhodococcus rhodochrous: 4535765_02088
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Entry
4535765_02088 CDS
T05521
Symbol
rnd
Name
(GenBank) ribonuclease III
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rrt
Rhodococcus rhodochrous
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrt03016
]
4535765_02088 (rnd)
Enzymes [BR:
rrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
4535765_02088 (rnd)
Transfer RNA biogenesis [BR:
rrt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
4535765_02088 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
SNV18189
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All DBs
Position
1:complement(2252873..2254126)
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AA seq
417 aa
AA seq
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MPAQNDEDEQKSTSVTTVPLLEPRDGVPEVVTTARGVADAAAMLAQGHGPLAVDAERASG
YRYSARAYLVQLRRDGAGTVLLDPIPTRDDLAPLAEVINDLEWVLHSADQDLPGLAELGL
RPAKLYDTELAGRLAGFPRVGLAAIVAETLGLELRKGHGAADWSTRPLPDSWLNYAALDV
EPLVELRDAMARELEQQNKTEWAAQEFEHIRLAGPPAPKPDRWRRTSKIHAIKDRRRLAI
VRELWTTRDEIAARRDIAPGRILPDSAIIAAAEANPTTIEQLQKLPVFGGPRQRRSSRAW
LNAIERARALPEDRLPPLTPPLTGPPPAGRWSRHHPEEAARLALARGELAALSEEVAVPV
ENLVSPELVRRLCWDWDVSDGVDVEEYIEGRFAEGGARPWQRALTVPRLAKALTAEN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacagaacgacgaggacgagcagaagagcacgagcgtgaccacggtgccgctc
ctcgaaccccgcgacggcgtcccggaggtcgtcaccacggcgcgcggggtcgccgacgcg
gcagcgatgctcgcgcagggacacggcccgctcgccgtcgacgccgaacgcgcatcgggc
taccgctactccgcgcgcgcctatctcgtacagctccgtcgtgacggcgccggcacggtg
ctgctcgatcccattcccacgcgggacgacctcgctcccctggccgaggtgatcaacgac
ctcgaatgggtcctgcattccgccgaccaggatctccccggcctggccgaactcgggctc
cgcccggcgaagttgtacgacaccgaactcgccggtcgtctcgccggattcccccgcgtc
ggtctcgccgcgatcgtggccgagaccctcggcctcgagctgcgcaagggccacggtgcg
gcggactggtcgacgcgaccgctccccgactcgtggctcaactacgccgcgctggacgtc
gaaccgctcgtggaactccgcgacgcgatggcgcgcgaactcgagcagcagaacaagacc
gagtgggccgcccaggaattcgagcacatccggctcgcggggccgcccgctccgaagccc
gaccggtggcggcggacgtccaagatccacgcgatcaaggaccggcgtcgcctcgcgatc
gtccgggaactgtggaccacgcgcgacgagatcgccgcccgacgcgacatcgcgccgggg
cgcatccttcccgactccgcgatcatcgccgccgcggaggcgaatcccaccaccatcgaa
cagttgcagaagcttccggtcttcggtggtccgcggcagcggcgttcctcgcgcgcgtgg
ctcaacgcgatcgagcgggcccgtgcactgccggaggaccggctcccacccctcacgccg
ccgctgaccgggcctccccctgccggtcgatggtcgcgtcaccaccccgaggaggccgca
cgtctcgccctcgcgcgcggcgaacttgccgctctgagcgaggaagtcgccgttcccgtg
gagaacctggtgagtcccgagctcgttcggcgcctgtgctgggactgggacgtctccgac
ggggtcgacgtcgaggagtacatcgaaggccgcttcgccgagggcggggcacggccgtgg
cagcgcgcgctgaccgtgccgcgactggcgaaggccctcacggcggagaactga
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