Rhodococcus rhodochrous: 4535765_02305
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Entry
4535765_02305 CDS
T05521
Symbol
cmdD
Name
(GenBank) non-ribosomal peptide synthetase
Organism
rrt
Rhodococcus rhodochrous
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
Thioesterase
Methyltransf_12
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
NodS
Motif
Other DBs
NCBI-ProteinID:
SNV18961
LinkDB
All DBs
Position
1:2484348..2491481
Genome browser
AA seq
2377 aa
AA seq
DB search
MKVRGFRVEPGEIEAVLGAHPAVARAAVVVRDTPGPHETGRLVAYVVLDREQTLLADPTR
AIGTVERWRAVYDDVYSAPPSEDTGAFAGWNATDTGKPIPLEQMQDWRDAAVRAVRRLRP
RRLLEIGVGSGLLLRELAPDCAEYWGTDFSAPTIETLHSAVRSQPWADRVTLRTQPAHAT
EGLPQRYFDTVVLNSVIQYFPDAAYLLEVLRKVLPLLAPGGSIHLGDVRNQALLPYFAAA
VELARADGTESADTIRERVRRATLSERELLLAPEFFAGLAGRLPGVTGVDIELGRMRTAN
ELGLYRYSVVLQTGTGPRSLADIPFRSWSGFGTLAAFADHLRTARPAALRVTGVPHTALR
SVIAAATALDAMPGHALVPEPDLRPRSDRIGPADFDLLGAELGYRVAVTWSQEPGSMEVV
VLRDDPDDRVDTALTDVFRPADDVGSLARYVNDPAAEERLDDVRRFVRERLPDYMVPAAF
VHMADLPVTVHGKLDRRALPVPEVATRSDSYIAPTTDTERSLARVFADVLGVDRVGTQDS
FFALGGDSIMSIQLVARAKAAGLVFSPRDVFEHRTVAALAMAVTPAGPTASMLEELPGDG
VGDVPLTPILRWLVERGRTYPGFCQSVSVPLPDRLREADLLAALQAVVDRHDMLRARLHA
VPGVADDLRLETRPIGSVSASSILRCVRVDDPTGPEFFAIAAAEHAAATGRLDPGRGVML
QAVRFDAGSASRLLLVAHHAVIDGVSWRILLGDLAAAAARLEHGLAPDPAPTGTSMRRWA
HGLVEVARRGTRTHELPFWVSTLSGPDPLLGTREVDPAVDVGATVDTVTVEVPAPTTAAL
LTVLPASFHGNVMDGLLAALAGAVVAQRADRGIDLAQVLVGLEGHGREEQAVPGADLSRT
IGWFTTAYPVRLDLTGIDVEAVACGGTAAGTAIKTVKEQLRAVPDHGIGYGMLRYLDDEG
RAALEPLPTPELTFNFHGRSTTPDAVTDIEFGGGLDPAQPVPAVISVNAMVVHTADGPVL
RADLAYPTGVIARPEVSDLAERWRRMLSGLARHVAEPGTGGRTPSDLPLVPMTQERLDEL
ERRYPGFEDVWPLTPLQHGFLFHALRNDSIDAYTVQLTLHLGGVVDPRRLRRAVAAMSAR
HPNLRVNFVFDGEWPPVQVVQASVELPLRERDLTDPDPDARAAELARLQAEDRTQRFDTA
AGPLVRLSLIRMGPDDHRLVFTNHHILLDGWSAPLLLKELLVLYGTDADTGALPPVRPYR
DYVRWLVQQDPAPARDAWSRYLAGPDRPTLVAPEAEQASVQALSEETARALDPVDTRRLE
GFVRDHGLTVGTVVQVAWGIVLAKLTSQCDVVFGSTVSGRPADVDGVEEMIGLFVNTVPV
RVRLDPYETLAALVERIRAEQTALLDRHHLGLTEIQQVAGPAAGFDTLTVFESYPIDRAA
LSDAVDIAGMQVRDVTGHDAGHYPLTLIAHVDDSLRLRLSYRPDLFDRVAAETILSQVAR
VLEVVVGRPQVPLGRLRLFGDEVPVVSAPGSARTRTWREILDDWMSGSPEAVAVVDAGRQ
WTYAELDARVERLAQLLVVRGAVPETTVVVAMRRSFLRVAAMLAVVRAGAVYVPVDPDQP
RDRVTAMIRTVAPLCVLVDGPEPAVPDEMSVVPVRDVDLDGGPATPVSDVHRRAPVRAGN
RAPVRADNAAYVIFTSGSTGTPKGVTVTHRGIAELVDRISTIADGDSRVAQSMLPVFDAS
LLETIVAFSAGARLVVVPPGIAAGDDLERVLADEEVTHLYTTPAVLATLNRDALPALTFV
SVGGEACPPSLAETWAHGRHMVNGYGPSEATVMSNLLDPLVPGGNLTVGPPMPGFDEYLL
DSYLQPVAGRAVGELYLTGPGLARGYAGQPGLTATRFVADPLGVPGRRMYRTGDLMRWVR
TAAGPEPVYVGRSDFQIQLRGLRIELEEVEAVLLRHRAVAQAVVVVRDDGSGDRLVGYVV
PTGVVPVEAPEILHFAATRLPRYMVPAVIVVLPGLPVTPSGKVDRSALPAAAPVGAAYRA
PRTPSEGVVARAFASVLERDRVGIDDNFFDLGGNSLAATAVASKLRSELGREVPLSLVFL
DPTPAGFADRLDEPPATATPTTGMFDVLIPLRGHGHRPPVFCVHPAIGLSWVYAGLLRYL
PDRPVYGLQLPYLSGGSLDATPAELAHRYVEELRVVQPEGPYTVLGWSQGGLIAHHMGVE
LRAAGETVDLVVLDYYPLERERRAHAHAELLAGLGIELPGAEPDEVTSDQLLDAVNRGLG
HETGLSAADLERILTAYAQVHRAAPALDLRRFDGDLLFVAAARSLGTGDGASPALWRPWV
SGTITDHTIDCDHLEMMTPAVLAVLGPILAGYLAAGS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtccgcggtttccgggtcgagcccggtgagatcgaagcggtcctgggtgcgcat
ccggcggtggcccgcgccgccgtggtcgtccgggacactccgggccctcacgagaccgga
cgactggtcgcgtatgtggtgctggaccgggagcagacactgctcgccgatccgactcgc
gcgatcggcaccgtcgagcggtggagagccgtgtacgacgacgtgtactccgcgccaccg
tccgaggacaccggcgccttcgcgggctggaacgccaccgacaccgggaagcccattccg
ctcgagcagatgcaggactggcgcgacgctgccgtgcgggccgttcggcggctccggccc
cggcgtctcctcgagatcggggtgggctcgggtctcctgctccgcgaactggctcccgac
tgcgccgagtactggggcacggacttctcggctccgacgatcgagacgctgcactccgcc
gtgcgatcgcagccgtgggccgaccgggtgacgctgaggacgcaaccggcgcacgcgacc
gagggattgccgcagcggtacttcgacaccgtcgtgctcaattcggtgatccagtacttc
ccggatgcggcgtacctgctcgaggtgctccggaaggtcctgccgctgctcgcacccggc
ggatcgatccatctcggcgatgtccggaaccaggcgctgctgccgtacttcgccgccgct
gtggaactcgcccgtgccgacggaaccgagagcgcggacacgatccgcgaacgcgtccgc
cgtgccacgctctccgagcgggaactgctgctcgcccccgagttcttcgccggcctggcc
ggtcgtctgcccggtgtcaccggggtcgacatcgaactcggccggatgcggacggccaac
gaactcggcctgtaccgctacagcgtggtgctgcagaccggtaccggacccaggtcgctc
gccgatattccgttccggtcctggtcgggattcggaaccctcgccgcgttcgccgaccac
ctgcggaccgcccgtcccgctgccctgcgcgtgaccggtgtaccgcacaccgccctgcgg
tcggtgatcgccgcggcgaccgccctcgatgcgatgcccggacacgcactcgtgccggaa
ccggacctccgaccacgatcggaccgcatcggtcccgcggacttcgatctgctcggcgcc
gaactcggctaccgggtcgccgtgacctggtcgcaggaaccgggatcgatggaggtggtc
gtcctccgcgacgacccggacgacagggtcgatacggcgctgaccgacgtcttccgtccg
gccgacgacgtgggcagcctcgcgcgctacgtcaacgaccccgccgcggaggagcgactc
gacgacgtccgacgcttcgtgcgggaacggttgcccgactacatggttccggccgcgttc
gtccacatggccgatctgccggtgacggtgcacggcaaactcgaccgccgcgcactgccg
gtcccggaggtcgcgacgcgcagcgacagctacatcgcaccgaccaccgacaccgaacgg
tccctggcccgggtcttcgcggacgtgctcggcgtcgaccgggtgggaacacaggattcg
ttcttcgccctcggcggcgattcgatcatgtcgatccagttggtcgcacgggcgaaggcc
gcaggtctggtgttctcgccccgagatgtgttcgaacacaggaccgttgcagcgctcgcc
atggcagtcaccccggccggcccgaccgcgtcgatgctcgaggaactgcccggcgacggc
gtcggcgacgttccgctcaccccgatactgcgctggctggtcgagcgcggccgaacgtat
ccgggtttctgccaatcggtatcggttccgctgccggaccgactccgcgaggccgacctt
ctcgcggcgctgcaggctgtcgtggatcggcacgacatgctgcgggcgcgcctgcacgca
gtgcccggagtcgccgacgacctgcgcctcgagacacggccgatcggatccgtctccgca
tcgtcgatcctgcgctgcgtccgggtcgatgatccgacagggcccgaattctttgcgatc
gccgccgccgaacatgccgccgcgaccggacgactggatcccggcaggggagtgatgctg
caggcggtccggttcgacgccggatccgcctcgcggttgttgctcgtggcacaccatgcc
gtgatcgacggtgtctcctggcgcatcctgctgggcgacctcgctgctgcggcggctcgc
ctcgaacacggactcgctccggatcccgcaccgacgggcacctcgatgcgccgctgggcg
cacggtctcgtcgaggtggcccgccgcggcacgcgcactcacgaactgccgttctgggtg
tcgacgctgtcgggtccggatccgctgctcggcacccgagaggtggaccccgcggtcgac
gtcggggccaccgtcgacaccgtcaccgtcgaggtacccgccccgacgaccgccgcgttg
ctgaccgtccttccggcgtccttccacgggaacgtgatggacggtcttctcgcagcactg
gccggagccgtcgtcgcgcagcgcgccgaccgggggatcgacctcgcccaggtgctggtc
gggctggaagggcacggccgggaggagcaggccgtgccgggagccgatctgtcccggacg
atcggatggttcaccaccgcctatccggtgcgactggacctgaccggtatcgacgtggag
gccgtggcatgcggcggcactgcagcggggaccgcgatcaagaccgtcaaggaacaactg
cgtgccgttcccgaccacgggatcggatacggaatgctgcggtacctcgatgacgagggg
cgcgccgcgctcgagcctctgccgacgcccgaactcaccttcaacttccacggccggagc
acgacgccggacgccgtcacggacatcgagttcggcggtggtctagatcccgcccagccg
gtaccggcggtgatctccgtcaacgccatggtcgtccacactgccgacggtccggtgctg
cgcgcggatctcgcctatccgaccggggtcatcgcccgcccggaggtgtccgaccttgcc
gagcggtggcgccgcatgctgagcggactcgcccggcacgtcgcggagccgggaacgggc
gggcgcacgccgtcggatctgccactggtcccgatgacccaggaacgcctcgacgaactc
gagcgccgctaccccggcttcgaggacgtgtggcccctcacccccttgcagcacggcttc
ctgttccatgccctccggaacgattcgatcgacgcgtacacggtgcaactgaccctgcac
ctgggcggtgtcgtcgatccgcgacgtctccggcgggcggtggccgccatgtcggcacgg
catccgaacctgcgggtgaacttcgtcttcgacggggagtggccacccgtgcaggtcgtg
caggcgtcggtcgaactgccgctgcgggagcgggatctgaccgatccggaccccgacgcc
cgtgcggcggaactggcccgtctgcaggcggaggaccggacgcagcgtttcgacacagct
gccggaccgctggtgcgcctgagcctgatcaggatgggaccggacgatcaccggttggtg
ttcaccaatcaccacatcctgctcgacggctggtcggcgccgttgctactgaaggaactc
ctcgtgctgtacggaaccgatgcggacaccggtgctctcccgccggtacgtccctaccgg
gactatgtgcggtggctcgtgcagcaggacccggctcccgcccgcgatgcctggtcgcgg
tacctggccggtccggatcgccccacgctggtcgctccggaggcggagcaggcctccgtg
caggccctgtccgaggagaccgcacgggcactcgatccggtggacacccggcgcctggaa
ggcttcgtccgggaccacgggctcaccgtcggcacggtggtgcaggtcgcgtggggcatc
gtgttggcgaagctcacctcgcagtgcgacgtcgtgttcggatcgaccgtctccgggcgg
cccgcagacgtcgatggggtcgaggagatgatcggcctgttcgtcaatacggttcccgtg
cgggtccggctcgacccgtacgagacgctcgccgcgctcgtcgagcggatccgcgccgag
cagaccgcactgctcgaccggcaccatctcggcctcacggagatccagcaggtcgccgga
cctgctgccggattcgacaccctgacggtgttcgagtcgtatccgatcgaccgtgcggct
ctgtccgatgcggtcgacatcgccggcatgcaggtgcgcgatgtgaccggacacgacgcc
ggtcattatccgctgaccctgatcgctcacgtcgacgactcactgcggctgcgattgagc
taccgtcccgacctgttcgatcgggtggcagcggagacgatactgtcgcaggtcgcccgg
gttctcgaggtcgtcgtcggccggccgcaggtgccgctcggccgcctccgcctgttcggg
gacgaggtgccggtcgtgtccgctcccggctccgcccgtacgcggacgtggagggagatc
ctcgacgactggatgtcgggttccccggaggccgtcgccgtcgtcgacgcgggccggcag
tggacctacgcggaactggacgcgcgagtggagcggctcgcgcaactgctcgtcgtccgc
ggcgcggtaccggagaccaccgtcgtcgtggcgatgcggcgttcgttcctgcgggtcgcc
gcgatgctcgccgtcgtccgcgccggtgccgtctacgtaccggtcgaccccgaccagccc
cgtgaccgtgtcaccgcgatgatccggacggtcgcgcccttgtgcgtgcttgtggacggc
ccggaaccggcggtgcccgacgagatgtccgtcgtgcccgttcgggatgtcgacctcgac
ggtgggccggcaacaccggtgtcggatgttcatcgccgcgcgccggtgcgcgccggcaac
cgtgcaccggtgcgcgccgacaacgccgcgtacgtgatcttcacgtccggatcgacgggc
acgccgaagggggtgacggtgacgcatcgcggtatcgccgagctggtcgatcggatctcg
acgatcgccgacggcgattcgcgtgtcgcacagtcgatgctgccggtgttcgatgcctcg
ctgctggagacgatcgttgcgttctcggccggggcgcggctcgtcgtcgtgccgcccggc
atcgccgccggcgacgacctcgagcgtgtcctcgcagacgaggaggtcacgcacctctac
accacacccgcggtgctggcgacgctgaatcgggacgcgctgccggccctgaccttcgtg
agtgtcggcggtgaggcgtgcccgccgtccctggcggagacgtgggcccacggtcgtcac
atggtcaacggctacggtccgagcgaagcgacggtgatgtcgaacctgctcgatccgctc
gtccccggtgggaatctcaccgtcgggccgccgatgcccggcttcgacgagtacctcctg
gactcgtacctgcagcccgtggccggccgcgcggtgggggagttgtacctcaccggaccg
ggtctggcgcgagggtatgccggacaacccggcctgaccgcgacgcgtttcgtcgccgac
cccctcggcgtaccgggacgccggatgtaccgcaccggggatctgatgcgctgggtgcgt
accgcggcgggccccgagcccgtttacgtggggcgcagtgatttccagatccagctacgc
ggtctgcgcatcgaactcgaggaggtcgaagcggtcctgctccggcatcgggccgtcgct
caggcggtggtcgtggtgcgtgacgacggcagcggtgaccggctcgtcggatatgtggtg
cccacgggggtcgttcccgtcgaggcgcccgagatcctgcacttcgcggccacccgattg
ccgcggtacatggttccggcggtgatcgtcgtgctgcccggactgccggtcactccgagc
gggaaggtggacaggtcggcgttgccggcggccgcgcccgtcggggccgcctaccgggcg
ccgcgcacaccgagcgaaggggtcgtcgcccgcgcgttcgcctccgtcctcgaacgcgat
cgggtcgggatcgacgacaacttcttcgacctcggcggcaattcgctcgccgcgactgcc
gtggcgtcgaagctgcgcagcgagctgggcagggaggttccgttgtccctggtcttcctc
gaccccaccccggccggattcgcggatcgcctcgacgaaccgccggcgaccgctactccg
acgaccgggatgttcgatgtgctgattcctctgcgcgggcacggtcaccgcccaccggtg
ttctgtgtgcatcccgcgatcggcctgtcctgggtctatgcgggactactgcgctacctg
ccggaccggccggtatacgggctgcaactgccgtacctctcgggcggatccctcgacgcg
acgcctgccgaactggcgcaccgctacgtcgaggagctacgggtcgtgcaaccggagggc
ccctacaccgtgctcggctggtcccagggcgggctgatcgcccaccacatgggtgtcgaa
ctgcgcgccgcgggggagaccgtcgacctggtcgttctcgactactacccgctcgaacgc
gaacggcgtgcccacgcccacgcggaactgctggcggggctgggcatcgaactgcccggt
gccgaaccggacgaggtgacctccgatcagctgctcgacgcggtgaaccgcggtctcggg
cacgagaccggactgtccgccgcggacctggaacggattctcacggcctacgcgcaggtc
caccgggcggcgccggcgctcgacctccgacgtttcgacggcgacctgctgttcgtcgcc
gcggcgcgatcgctcggcacaggcgacggtgcgtcaccggccctgtggcgcccgtgggtg
tccggcacgatcaccgatcacacgatcgattgcgatcacctggagatgatgaccccggcc
gtgctcgcggtcctcggcccgatcctggccggctatctcgccgccgggtcctga
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